PDB: 1q1s Compound: large t antigen Classification: PROTEIN TRANSPORT Entry date in PDB: 2004-03-30 Resolution [Å]: 2.30 R-Factor: 0.198

CHAIN: C SWISS-PROT/TREMBL: P52293    KEYWORD: 3D-structure    Nuclear protein    Protein transport    Repeat    Transport    SCOP: a.118.1.1 All alpha proteins    alpha-alpha superhelix    ARM repeat    Armadillo repeat    Importin alpha    Mouse (Mus musculus) GO:  binding    protein transporter activity    intracellular protein transport    protein-nucleus import

Image Source: PDB

Loops in ArchDB95 clusters

1q1s_C_112 - HH => SUBCLASS : 1.3.2
1q1s_C_367 - HH => SUBCLASS : 1.3.2
1q1s_C_434 - HH => SUBCLASS : 1.3.3
1q1s_C_410 - HH => SUBCLASS : 1.3.4
1q1s_C_194 - HH => SUBCLASS : 1.3.4
1q1s_C_112 - HH => SUBCLASS : 1.3.4
1q1s_C_367 - HH => SUBCLASS : 1.3.4
1q1s_C_152 - HH => SUBCLASS : 1.3.4
1q1s_C_457 - HH => SUBCLASS : 1.3.4
1q1s_C_152 - HH => SUBCLASS : 1.3.5
1q1s_C_434 - HH => SUBCLASS : 1.3.12
1q1s_C_391 - HH => SUBCLASS : 2.1.1
1q1s_C_307 - HH => SUBCLASS : 2.1.6
1q1s_C_349 - HH => SUBCLASS : 2.1.6
1q1s_C_307 - HH => SUBCLASS : 2.1.12
1q1s_C_470 - HH => SUBCLASS : 3.3.1
1q1s_C_163 - HH => SUBCLASS : 3.3.1
1q1s_C_78 - HH => SUBCLASS : 3.3.1
1q1s_C_246 - HH => SUBCLASS : 3.3.1
1q1s_C_295 - HH => SUBCLASS : 3.3.1
1q1s_C_422 - HH => SUBCLASS : 3.33.1

Loops not clustered in ArchDB

1q1s_C_90 - HH
1q1s_C_340 - HH
1q1s_C_325 - HH
1q1s_C_283 - HH
1q1s_C_265 - HH
1q1s_C_223 - HH
1q1s_C_206 - HH
1q1s_C_176 - HH
1q1s_C_134 - HH
1q1s_C_121 - HH
1q1s_C_379 - HH

1ejl I - percentage of sequence identity: 100
1ejy I - percentage of sequence identity: 100
1ial A - percentage of sequence identity: 99
1iq1 C - percentage of sequence identity: 100
1pjm B - percentage of sequence identity: 100
1pjn B - percentage of sequence identity: 100
1q1t C - percentage of sequence identity: 100
1y2a C - percentage of sequence identity: 100
2c1m A - percentage of sequence identity: 100
null nu - percentage of sequence identity: 0