PDB: 1qd6 Compound: outer membrane phospholipase (ompla) Classification: MEMBRANE PROTEIN Entry date in PDB: 1999-10-25 Resolution [Å]: 2.10 R-Factor: 0.226

CHAIN: A SWISS-PROT/TREMBL: P00631    KEYWORD: 3D-structure    Calcium    Complete proteome    Hydrolase    Lipid degradation    Outer membrane    Signal    EC: 3.1.1.32 SCOP: f.4.2.1 Membrane and cell surface proteins and peptides    Transmembrane beta-barrels    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Escherichia coli GO:  membrane    membrane    membrane    phospholipase activity    phospholipase activity    phospholipase activity    lipid metabolism    lipid metabolism    lipid metabolism    CHAIN: B SWISS-PROT/TREMBL: P00631    KEYWORD: 3D-structure    Calcium    Complete proteome    Hydrolase    Lipid degradation    Outer membrane    Signal    EC: 3.1.1.32 SCOP: f.4.2.1 Membrane and cell surface proteins and peptides    Transmembrane beta-barrels    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Escherichia coli GO:  membrane    membrane    membrane    phospholipase activity    phospholipase activity    phospholipase activity    lipid metabolism    lipid metabolism    lipid metabolism    CHAIN: C SWISS-PROT/TREMBL: P00631    KEYWORD: 3D-structure    Calcium    Complete proteome    Hydrolase    Lipid degradation    Outer membrane    Signal    EC: 3.1.1.32 SCOP: f.4.2.1 Membrane and cell surface proteins and peptides    Transmembrane beta-barrels    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Escherichia coli GO:  membrane    membrane    membrane    phospholipase activity    phospholipase activity    phospholipase activity    lipid metabolism    lipid metabolism    lipid metabolism    CHAIN: D SWISS-PROT/TREMBL: P00631    KEYWORD: 3D-structure    Calcium    Complete proteome    Hydrolase    Lipid degradation    Outer membrane    Signal    EC: 3.1.1.32 SCOP: f.4.2.1 Membrane and cell surface proteins and peptides    Transmembrane beta-barrels    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Outer membrane phospholipase A (OMPLA)    Escherichia coli GO:  membrane    membrane    membrane    phospholipase activity    phospholipase activity    phospholipase activity    lipid metabolism    lipid metabolism    lipid metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1qd6_C_221 - HA => SUBCLASS : 2.2.20
1qd6_C_195 - HA => SUBCLASS : 2.3.1
1qd6_C_154 - HA => SUBCLASS : 2.3.2
1qd6_C_206 - HA => SUBCLASS : 4.1.7
1qd6_C_33 - AR => SUBCLASS : 3.2.2

Loops in ArchDB95 clusters

1qd6_C_33 - AR => SUBCLASS : 3.1.4
1qd6_C_33 - AR => SUBCLASS : 3.1.6
1qd6_C_109 - HA => SUBCLASS : 2.1.3
1qd6_C_221 - HA => SUBCLASS : 2.2.6
1qd6_C_221 - HA => SUBCLASS : 2.2.18
1qd6_C_206 - HA => SUBCLASS : 4.1.8

Loops in ArchDB-EC clusters

1qd6_C_206 - HA => SUBCLASS : 4.1.4

Loops not clustered in ArchDB

1qd6_C_33 - AR
1qd6_C_169 - EH
1qd6_C_221 - HA
1qd6_C_206 - HA
1qd6_C_195 - HA
1qd6_C_154 - HA
1qd6_C_131 - HA
1qd6_C_109 - HA
1qd6_C_86 - HA
1qd6_C_65 - HA
1qd6_C_39 - HA
1qd6_C_235 - HA
1qd6_C_131 - HA
1qd6_C_86 - HA
1qd6_C_65 - HA
1qd6_C_39 - HA
1qd6_C_235 - HA
1qd6_C_188 - HE

1fw2 A - percentage of sequence identity: 100
1fw3 A - percentage of sequence identity: 100
1fw3 B - percentage of sequence identity: 100
1ild A - percentage of sequence identity: 99
1ilz A - percentage of sequence identity: 99
1im0 A - percentage of sequence identity: 99
1qd5 A - percentage of sequence identity: 100
1qd6 C - percentage of sequence identity: 100
1qd6 D - percentage of sequence identity: 100