PDB: 1qnn Compound: superoxide dismutase Classification: OXIDOREDUCTASE Entry date in PDB: 2000-06-21 Resolution [Å]: 1.80 R-Factor: 0.179

CHAIN: A SWISS-PROT/TREMBL: P19665    KEYWORD: 3D-structure    Complete proteome    Iron    Manganese    Metal-binding    Oxidoreductase    EC: 1.15.1.1 SCOP: a.2.11.1 All alpha proteins    Long alpha-hairpin    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis SCOP: d.44.1.1 Alpha and beta proteins (a+b)    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis GO:  metal ion binding    superoxide dismutase activity    superoxide metabolism    CHAIN: B SWISS-PROT/TREMBL: P19665    KEYWORD: 3D-structure    Complete proteome    Iron    Manganese    Metal-binding    Oxidoreductase    EC: 1.15.1.1 SCOP: a.2.11.1 All alpha proteins    Long alpha-hairpin    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis SCOP: d.44.1.1 Alpha and beta proteins (a+b)    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis GO:  metal ion binding    superoxide dismutase activity    superoxide metabolism    CHAIN: C SWISS-PROT/TREMBL: P19665    KEYWORD: 3D-structure    Complete proteome    Iron    Manganese    Metal-binding    Oxidoreductase    EC: 1.15.1.1 SCOP: a.2.11.1 All alpha proteins    Long alpha-hairpin    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis SCOP: d.44.1.1 Alpha and beta proteins (a+b)    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis GO:  metal ion binding    superoxide dismutase activity    superoxide metabolism    CHAIN: D SWISS-PROT/TREMBL: P19665    KEYWORD: 3D-structure    Complete proteome    Iron    Manganese    Metal-binding    Oxidoreductase    EC: 1.15.1.1 SCOP: a.2.11.1 All alpha proteins    Long alpha-hairpin    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Fe,Mn superoxide dismutase (SOD), N-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis SCOP: d.44.1.1 Alpha and beta proteins (a+b)    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Fe,Mn superoxide dismutase (SOD), C-terminal domain    Cambialistic superoxide dismutase    Porphyromonas gingivalis GO:  metal ion binding    superoxide dismutase activity    superoxide metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1qnn_A_171 - HH => SUBCLASS : 2.1.13
1qnn_A_53 - HH => SUBCLASS : 2.4.1
1qnn_A_62 - HH => SUBCLASS : 10.11.1
1qnn_A_104 - HE => SUBCLASS : 4.35.1
1qnn_A_122 - HA => SUBCLASS : 3.1.1

Loops in ArchDB-EC clusters

1qnn_A_62 - HH => SUBCLASS : 10.14.1

Loops not clustered in ArchDB

1qnn_A_134 - AR
1qnn_A_134 - AR
1qnn_A_151 - EH
1qnn_A_122 - HA
1qnn_A_21 - HH
1qnn_A_31 - HH
1qnn_A_91 - HH
1qnn_A_164 - HH

1qnn A - percentage of sequence identity: 100
1qnn B - percentage of sequence identity: 100
1qnn C - percentage of sequence identity: 100
1qnn D - percentage of sequence identity: 100
1uer A - percentage of sequence identity: 100
1uer B - percentage of sequence identity: 100
1uer C - percentage of sequence identity: 100
1uer D - percentage of sequence identity: 100
1ues A - percentage of sequence identity: 99
1ues B - percentage of sequence identity: 99
1ues C - percentage of sequence identity: 99
1ues D - percentage of sequence identity: 99