PDB: 1qpx Compound: papd chaperone Classification: CHAPERONE Entry date in PDB: 1999-07-07 Resolution [Å]: 2.40 R-Factor: 0.189

CHAIN: A SWISS-PROT/TREMBL: P15319    KEYWORD: 3D-structure    Chaperone    Fimbria    Immunoglobulin domain    Periplasmic    Signal    SCOP: b.1.11.1 All beta proteins    Immunoglobulin-like beta-sandwich    PapD-like    Pilus chaperone    Pilus chaperone PapD, N-domain    Escherichia coli SCOP: b.7.2.1 All beta proteins    C2 domain-like    Periplasmic chaperone C-domain    Periplasmic chaperone C-domain    PapD    Escherichia coli GO:  periplasmic space (sensu Gram-negative Bacteria)    protein binding    cell wall organization and biogenesis    CHAIN: B SWISS-PROT/TREMBL: P15319    KEYWORD: 3D-structure    Chaperone    Fimbria    Immunoglobulin domain    Periplasmic    Signal    SCOP: b.1.11.1 All beta proteins    Immunoglobulin-like beta-sandwich    PapD-like    Pilus chaperone    Pilus chaperone PapD, N-domain    Escherichia coli SCOP: b.7.2.1 All beta proteins    C2 domain-like    Periplasmic chaperone C-domain    Periplasmic chaperone C-domain    PapD    Escherichia coli GO:  periplasmic space (sensu Gram-negative Bacteria)    protein binding    cell wall organization and biogenesis

Image Source: PDB

Loops in ArchDB40 clusters

1qpx_A_202 - HA => SUBCLASS : 2.3.1
1qpx_A_31 - HA => SUBCLASS : 4.2.4
1qpx_A_2 - AR => SUBCLASS : 3.9.2
1qpx_A_171 - AR => SUBCLASS : 3.27.1
1qpx_A_8 - AR => SUBCLASS : 4.7.1
1qpx_A_17 - AR => SUBCLASS : 6.15.1
1qpx_A_177 - AR => SUBCLASS : 6.29.1

Loops in ArchDB95 clusters

1qpx_A_151 - EH => SUBCLASS : 2.1.20
1qpx_A_151 - EH => SUBCLASS : 2.1.45
1qpx_A_2 - AR => SUBCLASS : 3.4.2
1qpx_A_171 - AR => SUBCLASS : 3.31.1
1qpx_A_17 - AR => SUBCLASS : 4.34.1
1qpx_A_8 - AR => SUBCLASS : 5.2.1
1qpx_A_177 - AR => SUBCLASS : 6.47.1
1qpx_A_202 - HA => SUBCLASS : 2.3.1
1qpx_A_190 - HA => SUBCLASS : 3.1.2
1qpx_A_31 - HA => SUBCLASS : 4.3.5

Loops not clustered in ArchDB

1qpx_A_44 - AR
1qpx_A_50 - AR
1qpx_A_56 - AR
1qpx_A_64 - AR
1qpx_A_107 - AR
1qpx_A_140 - AR
1qpx_A_84 - HA
1qpx_A_133 - HA
1qpx_A_160 - HE

1n0l A - percentage of sequence identity: 98
1n0l C - percentage of sequence identity: 98
1pdk A - percentage of sequence identity: 98
1qpp A - percentage of sequence identity: 98
1qpp B - percentage of sequence identity: 98
1qpx A - percentage of sequence identity: 100
1qpx B - percentage of sequence identity: 100
3dpa - - percentage of sequence identity: 99