PDB: 1qqh Compound: papillomavirus transcription factor e2 Classification: VIRUS/VIRAL PROTEIN Entry date in PDB: 1999-06-21 Resolution [Å]: 2.10 R-Factor: 0.256

CHAIN: A SWISS-PROT/TREMBL: P06790    KEYWORD: 3D-structure    Activator    DNA replication    DNA-binding    Early protein    Nuclear protein    Repressor    Trans-acting factor    Transcription regulation    SCOP: b.91.1.1 All beta proteins    E2 regulatory, transactivation domain    E2 regulatory, transactivation domain    E2 regulatory, transactivation domain    E2 regulatory, transactivation domain    Human papillomavirus type 18 GO:  host cell nucleus    DNA binding    nucleotide binding    transcription factor activity    regulation of DNA replication    regulation of transcription, DNA-dependent

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Loops in ArchDB40 clusters

1qqh_A_152 - HA => SUBCLASS : 2.2.2
1qqh_A_128 - HA => SUBCLASS : 3.19.1

Loops in ArchDB95 clusters

1qqh_A_165 - EH => SUBCLASS : 0.1.10
1qqh_A_68 - HH => SUBCLASS : 14.4.1
1qqh_A_152 - HA => SUBCLASS : 2.2.2
1qqh_A_128 - HA => SUBCLASS : 4.3.1

Loops not clustered in ArchDB

1qqh_A_146 - AR
1qqh_A_192 - AR
1qqh_A_110 - HA
1qqh_A_157 - HA
1qqh_A_185 - HA
1qqh_A_99 - HE
1qqh_A_172 - HE

1tue B - percentage of sequence identity: 100
1tue E - percentage of sequence identity: 100
1tue G - percentage of sequence identity: 100
1tue J - percentage of sequence identity: 100
1tue L - percentage of sequence identity: 100
1tue Q - percentage of sequence identity: 100