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Information on 1rfn
PDB: 1rfn
Compound: coagulation factor ix
Classification: COAGULATION FACTOR
Entry date in PDB: 1999-09-01
Resolution [Å]: 2.80
R-Factor: 0.216


CHAIN: A
SWISS-PROT/TREMBL: P00740
   KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    Disease mutation    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hemophilia    Hydrolase    Hydroxylation    Pharmaceutical    Phosphorylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Sulfation    Vitamin K    Zymogen   
EC: 3.4.21.22
SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Coagulation factor IXa, protease domain    Human (Homo sapiens)
GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis   


CHAIN: B
SWISS-PROT/TREMBL: P00740
   KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    Disease mutation    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hemophilia    Hydrolase    Hydroxylation    Pharmaceutical    Phosphorylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Sulfation    Vitamin K    Zymogen   
EC: 3.4.21.22
SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Factor IX (IXa)    Human (Homo sapiens)
GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis   
1rfn Image
Image Source: PDB

Stored Loops of 1rfn

Loops in ArchDB-EC clusters

1rfn_A_165 - HE => SUBCLASS : 8.4.1

Loops not clustered in ArchDB

1rfn_A_180 - AR
1rfn_A_51 - AR
1rfn_B_107 - AR
1rfn_A_20 - AR
1rfn_A_104 - EH
1rfn_A_226 - EH
1rfn_A_156 - EH
1rfn_A_207 - HA
1rfn_A_198 - HA
1rfn_B_98 - HA
1rfn_A_135 - HA
1rfn_A_81 - HA
1rfn_A_65 - HA
1rfn_A_42 - HA
1rfn_A_30 - HA
1rfn_B_115 - HA
1rfn_A_126 - HE

Homologous structures to 1rfn classified in ArchDB

1x7a C - percentage of sequence identity: 88