PDB: 1rkg Compound: vitamin d3 receptor Classification: HORMONE/GROWTH FACTOR RECEPTOR Entry date in PDB: 2004-04-13 Resolution [Å]: 1.90 R-Factor: 0.194

CHAIN: A SWISS-PROT/TREMBL: P13053    KEYWORD: DNA-binding    Nuclear protein    Phosphorylation    Receptor    Transcription regulation    Zinc-finger    SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Vitamin D nuclear receptor    Rat (Rattus norvegicus) GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent    CHAIN: C SWISS-PROT/TREMBL: Q15648    KEYWORD: Activator    Alternative splicing    DNA-binding    Nuclear protein    Repeat    Transcription regulation    GO:

Image Source: PDB

Loops in ArchDB95 clusters

1rkg_A_290 - EH => SUBCLASS : 1.1.5
1rkg_A_290 - EH => SUBCLASS : 1.1.8
1rkg_A_404 - HH => SUBCLASS : 2.1.4
1rkg_A_404 - HH => SUBCLASS : 2.3.2
1rkg_A_303 - HH => SUBCLASS : 3.1.6
1rkg_A_293 - HH => SUBCLASS : 3.2.1
1rkg_A_223 - HH => SUBCLASS : 8.1.1
1rkg_A_323 - HH => SUBCLASS : 10.2.1
1rkg_A_252 - HE => SUBCLASS : 0.1.33

Loops not clustered in ArchDB

1rkg_A_275 - HA
1rkg_A_281 - HA
1rkg_A_126 - HH
1rkg_A_345 - HH
1rkg_A_375 - HH

1db1 A - percentage of sequence identity: 90
1ie8 A - percentage of sequence identity: 90
1rjk A - percentage of sequence identity: 100
1rk3 A - percentage of sequence identity: 100
1rkh A - percentage of sequence identity: 100
1s0z A - percentage of sequence identity: 90
1s19 A - percentage of sequence identity: 90
1txi A - percentage of sequence identity: 90