ArchDB - Biological DataBase of Protein Loops

Information on 1s5t

PDB: 1s5t
Compound: dihydrodipicolinate synthase
Classification: LYASE
Entry date in PDB: 2004-04-27
Resolution [Å]: 2.30
R-Factor: 0.180

CHAIN: A

SWISS-PROT/TREMBL: P05640
   KEYWORD: 3D-structure    Complete proteome    Diaminopimelate biosynthesis    Lyase    Lysine biosynthesis
EC: 4.2.1.52
SCOP: c.1.10.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Aldolase    Class I aldolase    Dihydrodipicolinate synthase    Escherichia coli
GO:

CHAIN: B

Image Source: PDB

Stored Loops of 1s5t

Loops in ArchDB95 clusters

1s5t_A_182 - EH => SUBCLASS : 1.1.32
1s5t_A_182 - EH => SUBCLASS : 2.1.15
1s5t_A_157 - EH => SUBCLASS : 4.38.1
1s5t_A_73 - EH => SUBCLASS : 5.32.1
1s5t_A_38 - EH => SUBCLASS : 11.11.1
1s5t_A_4 - EH => SUBCLASS : 12.9.1
1s5t_A_211 - HH => SUBCLASS : 2.2.1
1s5t_A_136 - HH => SUBCLASS : 5.10.1

Loops not clustered in ArchDB

1s5t_A_99 - EH
1s5t_A_130 - EH
1s5t_A_201 - EH
1s5t_A_191 - HE
1s5t_A_168 - HE
1s5t_A_145 - HE
1s5t_A_112 - HE
1s5t_A_82 - HE
1s5t_A_53 - HE
1s5t_A_21 - HE
1s5t_A_226 - HH
1s5t_A_250 - HH

Homologous structures to 1s5t classified in ArchDB

1dhp A - percentage of sequence identity: 99
1dhp B - percentage of sequence identity: 99
1s5t A - percentage of sequence identity: 100
1s5t B - percentage of sequence identity: 100
1s5v A - percentage of sequence identity: 99
1s5v B - percentage of sequence identity: 99
1s5w A - percentage of sequence identity: 99
1s5w B - percentage of sequence identity: 99
1yxc A - percentage of sequence identity: 99
1yxc B - percentage of sequence identity: 99
1yxd A - percentage of sequence identity: 99
1yxd B - percentage of sequence identity: 99
2a6l A - percentage of sequence identity: 99
2a6l B - percentage of sequence identity: 99
2a6n A - percentage of sequence identity: 99
2a6n B - percentage of sequence identity: 99