PDB: 1szw Compound: trna pseudouridine synthase d Classification: LYASE Entry date in PDB: 2004-04-20 Resolution [Å]: 2.00 R-Factor: 0.194

CHAIN: A SWISS-PROT/TREMBL: Q57261    KEYWORD: 3D-structure    Complete proteome    Lyase    tRNA processing    EC: 4.2.1.70 SCOP: d.265.1.4 Alpha and beta proteins (a+b)    Pseudouridine synthase    Pseudouridine synthase    tRNA pseudouridine synthase TruD    tRNA pseudouridine synthase TruD    Escherichia coli GO:  pseudouridylate synthase activity    tRNA processing    CHAIN: B SWISS-PROT/TREMBL: Q57261    KEYWORD: 3D-structure    Complete proteome    Lyase    tRNA processing    EC: 4.2.1.70 SCOP: d.265.1.4 Alpha and beta proteins (a+b)    Pseudouridine synthase    Pseudouridine synthase    tRNA pseudouridine synthase TruD    tRNA pseudouridine synthase TruD    Escherichia coli GO:  pseudouridylate synthase activity    tRNA processing

Image Source: PDB

Loops in ArchDB40 clusters

1szw_A_283 - HE => SUBCLASS : 4.10.1
1szw_A_55 - HE => SUBCLASS : 6.1.1
1szw_A_55 - HE => SUBCLASS : 6.2.1
1szw_A_306 - HA => SUBCLASS : 2.2.20
1szw_A_224 - HA => SUBCLASS : 6.4.1
1szw_A_73 - HA => SUBCLASS : 8.10.1
1szw_A_233 - EH => SUBCLASS : 2.3.4
1szw_A_43 - EH => SUBCLASS : 4.27.1
1szw_A_128 - EH => SUBCLASS : 4.35.1
1szw_A_128 - EH => SUBCLASS : 4.35.2

Loops in ArchDB95 clusters

1szw_A_233 - EH => SUBCLASS : 2.4.4
1szw_A_43 - EH => SUBCLASS : 5.9.1
1szw_A_283 - HE => SUBCLASS : 2.1.7
1szw_A_55 - HE => SUBCLASS : 6.1.1
1szw_A_55 - HE => SUBCLASS : 6.1.3
1szw_A_306 - HA => SUBCLASS : 2.2.6
1szw_A_224 - HA => SUBCLASS : 6.5.1
1szw_A_73 - HA => SUBCLASS : 8.25.1

Loops not clustered in ArchDB

1szw_A_27 - AR
1szw_A_84 - AR
1szw_A_109 - AR
1szw_A_297 - AR
1szw_A_317 - EH
1szw_A_257 - EH
1szw_A_189 - HE
1szw_A_241 - HE
1szw_A_141 - HH
1szw_A_170 - HH
1szw_A_269 - HH

1sb7 A - percentage of sequence identity: 100
1sb7 B - percentage of sequence identity: 100
1si7 A - percentage of sequence identity: 100
1szw A - percentage of sequence identity: 100
1szw B - percentage of sequence identity: 100