PDB: 1t7p Compound: DNA polymerase Classification: COMPLEX(HYDROLASE/ELECTRON TRANSPRT/DNA) Entry date in PDB: 1998-02-25 Resolution [Å]: 2.20 R-Factor: 0.240

CHAIN: A SWISS-PROT/TREMBL: P00581    KEYWORD: 3D-structure    DNA replication    DNA-binding    DNA-directed DNA polymerase    Exonuclease    Hydrolase    Transferase    EC: 2.7.7.7 SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of T7 DNA polymerase    Bacteriophage T7 SCOP: e.8.1.1 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    DNA polymerase I    T7 phage DNA polymerase    Bacteriophage T7 GO:  DNA binding    DNA-directed DNA polymerase activity    DNA replication    CHAIN: B SWISS-PROT/TREMBL: P00274    KEYWORD: 3D-structure    Complete proteome    Electron transport    Redox-active center    SCOP: c.47.1.1 Alpha and beta proteins (a/b)    Thioredoxin fold    Thioredoxin-like    Thioltransferase    Thioredoxin    Escherichia coli GO:  electron transporter activity    electron transporter activity    electron transporter activity    electron transporter activity    electron transporter activity    electron transporter activity    electron transport    electron transport    electron transport    electron transport    electron transport    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1t7p_A_39 - HE => SUBCLASS : 1.1.2
1t7p_A_39 - HE => SUBCLASS : 2.2.5
1t7p_A_39 - HE => SUBCLASS : 3.2.2
1t7p_A_406 - HE => SUBCLASS : 5.37.1
1t7p_A_592 - HA => SUBCLASS : 3.1.1
1t7p_A_18 - HA => SUBCLASS : 4.1.1
1t7p_A_419 - HA => SUBCLASS : 9.2.1
1t7p_A_30 - EH => SUBCLASS : 0.1.29
1t7p_A_30 - EH => SUBCLASS : 0.1.36
1t7p_A_30 - EH => SUBCLASS : 1.1.46
1t7p_A_56 - EH => SUBCLASS : 1.4.4
1t7p_A_655 - EH => SUBCLASS : 2.1.1
1t7p_A_600 - EH => SUBCLASS : 2.1.2
1t7p_A_470 - EH => SUBCLASS : 2.6.2
1t7p_A_545 - HH => SUBCLASS : 1.2.11
1t7p_A_203 - HH => SUBCLASS : 2.1.1
1t7p_A_489 - HH => SUBCLASS : 2.12.1
1t7p_A_534 - HH => SUBCLASS : 3.1.1
1t7p_A_518 - HH => SUBCLASS : 3.2.6
1t7p_A_505 - HH => SUBCLASS : 4.2.2
1t7p_A_366 - HH => SUBCLASS : 5.20.1

Loops in ArchDB95 clusters

1t7p_A_30 - EH => SUBCLASS : 1.1.12
1t7p_A_30 - EH => SUBCLASS : 1.1.40
1t7p_A_56 - EH => SUBCLASS : 1.4.5
1t7p_A_655 - EH => SUBCLASS : 2.1.1
1t7p_A_600 - EH => SUBCLASS : 2.1.11
1t7p_A_470 - EH => SUBCLASS : 2.6.4
1t7p_A_545 - HH => SUBCLASS : 1.2.6
1t7p_A_203 - HH => SUBCLASS : 2.1.1
1t7p_A_489 - HH => SUBCLASS : 2.10.1
1t7p_A_534 - HH => SUBCLASS : 3.1.1
1t7p_A_518 - HH => SUBCLASS : 3.1.2
1t7p_A_505 - HH => SUBCLASS : 4.10.1
1t7p_A_366 - HH => SUBCLASS : 5.29.1
1t7p_A_39 - HE => SUBCLASS : 1.2.3
1t7p_A_39 - HE => SUBCLASS : 2.1.3
1t7p_A_406 - HE => SUBCLASS : 5.29.2
1t7p_A_646 - HA => SUBCLASS : 2.6.3
1t7p_A_592 - HA => SUBCLASS : 3.1.1
1t7p_A_18 - HA => SUBCLASS : 4.1.1
1t7p_A_419 - HA => SUBCLASS : 9.9.1

Loops in ArchDB-EC clusters

1t7p_A_505 - HH => SUBCLASS : 4.4.2

Loops not clustered in ArchDB

1t7p_A_415 - AR
1t7p_A_415 - AR
1t7p_A_88 - EH
1t7p_A_232 - EH
1t7p_A_329 - EH
1t7p_A_361 - EH
1t7p_A_431 - EH
1t7p_A_356 - HA
1t7p_A_264 - HA
1t7p_A_2 - HA
1t7p_A_18 - HA
1t7p_A_264 - HA
1t7p_A_356 - HA
1t7p_A_419 - HA
1t7p_A_592 - HA
1t7p_A_2 - HA
1t7p_A_646 - HA
1t7p_A_609 - HE
1t7p_A_65 - HE
1t7p_A_212 - HE
1t7p_A_236 - HE
1t7p_A_340 - HE
1t7p_A_663 - HE
1t7p_A_448 - HE
1t7p_A_561 - HE
1t7p_A_377 - HH
1t7p_A_91 - HH
1t7p_A_127 - HH
1t7p_A_495 - HH
1t7p_A_479 - HH
1t7p_A_165 - HH

1skr A - percentage of sequence identity: 100
1sks A - percentage of sequence identity: 100
1skw A - percentage of sequence identity: 100
1sl0 A - percentage of sequence identity: 100
1sl0 C - percentage of sequence identity: 100
1sl1 A - percentage of sequence identity: 100
1sl2 A - percentage of sequence identity: 100
1t8e A - percentage of sequence identity: 100
1tk0 A - percentage of sequence identity: 100
1tk5 A - percentage of sequence identity: 100
1tk8 A - percentage of sequence identity: 100
1tkd A - percentage of sequence identity: 100
1x9m A - percentage of sequence identity: 100
1x9s A - percentage of sequence identity: 100
1x9w A - percentage of sequence identity: 100
1zyq A - percentage of sequence identity: 99
2trx A - percentage of sequence identity: 100