PDB: 1tyf Compound: clp peptidase Classification: PEPTIDASE Entry date in PDB: 1998-06-17 Resolution [Å]: 2.20 R-Factor: 0.219

CHAIN: A SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: C SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: D SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: E SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: F SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: G SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: H SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: I SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: J SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: K SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: L SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: M SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis    CHAIN: N SWISS-PROT/TREMBL: P19245    KEYWORD: 3D-structure    Complete proteome    Heat shock    Hydrolase    Serine protease    EC: 3.4.21.92 SCOP: c.14.1.1 Alpha and beta proteins (a/b)    ClpP/crotonase    ClpP/crotonase    Clp protease, ClpP subunit    Clp protease, ClpP subunit    Escherichia coli GO:  endopeptidase Clp activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1tyf_A_28 - EH => SUBCLASS : 4.40.1
1tyf_A_28 - EH => SUBCLASS : 4.55.1
1tyf_A_111 - AR => SUBCLASS : 3.7.3
1tyf_A_111 - AR => SUBCLASS : 4.3.1
1tyf_A_132 - HH => SUBCLASS : 3.1.1

Loops in ArchDB95 clusters

1tyf_A_28 - EH => SUBCLASS : 4.32.1
1tyf_A_111 - AR => SUBCLASS : 2.2.1
1tyf_A_132 - HH => SUBCLASS : 3.1.1
1tyf_A_19 - HE => SUBCLASS : 1.2.1
1tyf_A_161 - HE => SUBCLASS : 2.7.7
1tyf_A_70 - HE => SUBCLASS : 3.16.5
1tyf_A_37 - HE => SUBCLASS : 4.1.1
1tyf_A_176 - HE => SUBCLASS : 4.4.1
1tyf_A_37 - HE => SUBCLASS : 5.6.2

Loops in ArchDB-EC clusters

1tyf_A_132 - HH => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1tyf_A_111 - AR
1tyf_A_59 - EH
1tyf_A_87 - EH
1tyf_A_118 - EH
1tyf_A_172 - EH
1tyf_A_98 - HE

1tyf A - percentage of sequence identity: 100
1tyf B - percentage of sequence identity: 100
1tyf C - percentage of sequence identity: 100
1tyf D - percentage of sequence identity: 100
1tyf E - percentage of sequence identity: 100
1tyf F - percentage of sequence identity: 100
1tyf G - percentage of sequence identity: 100
1tyf H - percentage of sequence identity: 100
1tyf I - percentage of sequence identity: 100
1tyf J - percentage of sequence identity: 100
1tyf K - percentage of sequence identity: 100
1tyf L - percentage of sequence identity: 100
1tyf M - percentage of sequence identity: 100
1tyf N - percentage of sequence identity: 100