PDB: 1ub4 Compound: mazf protein Classification: DNA BINDING PROTEIN Entry date in PDB: 2003-05-20 Resolution [Å]: 1.70 R-Factor: 0.210

CHAIN: A SWISS-PROT/TREMBL: P33645    KEYWORD: Complete proteome    DNA-binding    SCOP: b.34.6.2 All beta proteins    SH3-like barrel    Cell growth inhibitor/plasmid maintenance toxic component    Kid/PemK    MazF protein    Escherichia coli GO:  DNA binding    DNA binding    CHAIN: B SWISS-PROT/TREMBL: P33645    KEYWORD: Complete proteome    DNA-binding    SCOP: b.34.6.2 All beta proteins    SH3-like barrel    Cell growth inhibitor/plasmid maintenance toxic component    Kid/PemK    MazF protein    Escherichia coli GO:  DNA binding    DNA binding    CHAIN: C SWISS-PROT/TREMBL: P18534    KEYWORD: 3D-structure    Complete proteome    DNA-binding    SCOP: b.129.1.1 All beta proteins    MazE/MraZ-like    MazE/MraZ-like    Kis/PemI addiction antidote    MazE    Escherichia coli GO:

Image Source: PDB

Loops in ArchDB40 clusters

1ub4_A_89 - EH => SUBCLASS : 2.2.2
1ub4_A_28 - EH => SUBCLASS : 3.6.1

Loops in ArchDB95 clusters

1ub4_A_79 - EH => SUBCLASS : 1.1.25
1ub4_A_89 - EH => SUBCLASS : 2.2.3
1ub4_A_28 - EH => SUBCLASS : 3.4.2
1ub4_A_71 - AR => SUBCLASS : 4.4.3

Loops not clustered in ArchDB

1ub4_A_46 - AR
1ub4_C_445 - EH
1ub4_C_412 - EH
1ub4_A_11 - HA
1ub4_C_433 - HA
1ub4_C_406 - HA
1ub4_A_61 - HA
1ub4_A_83 - HE
1ub4_A_37 - HE
1ub4_C_419 - HE

1mvf D - percentage of sequence identity: 100
1ub4 A - percentage of sequence identity: 100
1ub4 B - percentage of sequence identity: 100