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Information on 1udz
PDB: 1udz
Compound: isoleucyl-trna synthetase
Classification: LIGASE
Entry date in PDB: 2004-03-23
Resolution [Å]: 1.80
R-Factor: 0.203


CHAIN: A
SWISS-PROT/TREMBL: P56690
   KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Ligase    Metal-binding    Protein biosynthesis    Zinc   
EC: 6.1.1.5
SCOP: b.51.1.1 All beta proteins    ValRS/IleRS/LeuRS editing domain    ValRS/IleRS/LeuRS editing domain    ValRS/IleRS/LeuRS editing domain    Isoleucyl-tRNA synthetase (IleRS)    Thermus thermophilus
GO:  ATP binding    isoleucine-tRNA ligase activity    tRNA ligase activity    isoleucyl-tRNA aminoacylation    tRNA aminoacylation for protein translation   


CHAIN: B
SWISS-PROT/TREMBL: P56690
   KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Ligase    Metal-binding    Protein biosynthesis    Zinc   
EC: 6.1.1.5
SCOP: b.51.1.1 All beta proteins    ValRS/IleRS/LeuRS editing domain    ValRS/IleRS/LeuRS editing domain    ValRS/IleRS/LeuRS editing domain    Isoleucyl-tRNA synthetase (IleRS)    Thermus thermophilus
GO:  ATP binding    isoleucine-tRNA ligase activity    tRNA ligase activity    isoleucyl-tRNA aminoacylation    tRNA aminoacylation for protein translation   
1udz Image
Image Source: PDB

Stored Loops of 1udz

Loops in ArchDB40 clusters

1udz_A_247 - HA => SUBCLASS : 2.3.1
1udz_A_256 - EH => SUBCLASS : 0.1.25
1udz_A_239 - AR => SUBCLASS : 4.3.1

Loops in ArchDB95 clusters

1udz_A_239 - AR => SUBCLASS : 2.2.1
1udz_A_239 - AR => SUBCLASS : 4.6.3
1udz_A_247 - HA => SUBCLASS : 2.3.1

Loops not clustered in ArchDB

1udz_A_222 - AR
1udz_A_275 - AR
1udz_A_303 - AR
1udz_A_317 - EH
1udz_A_204 - HA
1udz_A_262 - HE
1udz_A_359 - HE
1udz_A_326 - HH

Homologous structures to 1udz classified in ArchDB

1ile - - percentage of sequence identity: 98
1jzq A - percentage of sequence identity: 98
1jzs A - percentage of sequence identity: 98
1udz A - percentage of sequence identity: 100
1udz B - percentage of sequence identity: 100
1ue0 A - percentage of sequence identity: 99
1ue0 B - percentage of sequence identity: 99
1wk8 A - percentage of sequence identity: 98
1wk8 B - percentage of sequence identity: 98
1wny A - percentage of sequence identity: 99
1wny B - percentage of sequence identity: 99
1wnz A - percentage of sequence identity: 99