PDB: 1uwv Compound: 23s rrna (uracil-5-)-methyltransferase ruma Classification: METHYLTRANSFERASE Entry date in PDB: 2004-03-18 Resolution [Å]: 1.95 R-Factor: 0.186

CHAIN: A SWISS-PROT/TREMBL: P55135    KEYWORD: Complete proteome    Methyltransferase    rRNA processing    Transferase    EC: 2.1.1.- SCOP: b.40.4.12 All beta proteins    OB-fold    Nucleic acid-binding proteins    TRAM domain    rRNA (Uracil-5-)-methyltransferase RumA, N-terminal domain    Escherichia coli SCOP: c.66.1.40 Alpha and beta proteins (a/b)    S-adenosyl-L-methionine-dependent methyltransferases    S-adenosyl-L-methionine-dependent methyltransferases    (Uracil-5-)-methyltransferase    rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain    Escherichia coli GO:  RNA binding    RNA methyltransferase activity    S-adenosylmethionine-dependent methyltransferase activity    RNA processing

Image Source: PDB

Loops in ArchDB40 clusters

1uwv_A_189 - HA => SUBCLASS : 2.2.2
1uwv_A_49 - HA => SUBCLASS : 2.2.7
1uwv_A_137 - HA => SUBCLASS : 4.1.1
1uwv_A_17 - HA => SUBCLASS : 5.1.7
1uwv_A_148 - HA => SUBCLASS : 6.4.1
1uwv_A_230 - HA => SUBCLASS : 7.4.1
1uwv_A_310 - EH => SUBCLASS : 2.1.1
1uwv_A_383 - EH => SUBCLASS : 2.1.9
1uwv_A_205 - EH => SUBCLASS : 5.3.2

Loops in ArchDB95 clusters

1uwv_A_310 - EH => SUBCLASS : 2.1.1
1uwv_A_383 - EH => SUBCLASS : 2.1.9
1uwv_A_205 - EH => SUBCLASS : 5.4.1
1uwv_A_189 - HA => SUBCLASS : 2.2.2
1uwv_A_49 - HA => SUBCLASS : 2.2.3
1uwv_A_137 - HA => SUBCLASS : 4.1.1
1uwv_A_17 - HA => SUBCLASS : 5.4.5
1uwv_A_148 - HA => SUBCLASS : 6.5.1
1uwv_A_230 - HA => SUBCLASS : 7.3.1

Loops not clustered in ArchDB

1uwv_A_240 - AR
1uwv_A_37 - AR
1uwv_A_130 - AR
1uwv_A_143 - AR
1uwv_A_200 - AR
1uwv_A_336 - AR
1uwv_A_61 - EH
1uwv_A_289 - EH
1uwv_A_359 - EH
1uwv_A_254 - EH
1uwv_A_156 - EH
1uwv_A_29 - HA
1uwv_A_407 - HA
1uwv_A_248 - HA
1uwv_A_391 - HE
1uwv_A_375 - HE
1uwv_A_318 - HE
1uwv_A_301 - HE
1uwv_A_276 - HE
1uwv_A_213 - HE
1uwv_A_167 - HE
1uwv_A_97 - HE
1uwv_A_268 - HH

2bh2 A - percentage of sequence identity: 100
2bh2 B - percentage of sequence identity: 100