PDB: 1vde Compound: pi-scei Classification: ENDONUCLEASE Entry date in PDB: 1998-04-08 Resolution [Å]: 2.40 R-Factor: 0.192

CHAIN: A SWISS-PROT/TREMBL: P17255    KEYWORD: 3D-structure    ATP synthesis    ATP-binding    Autocatalytic cleavage    DNA-binding    Endonuclease    Hydrogen ion transport    Hydrolase    Intron homing    Nuclease    Protein splicing    EC: 3.6.3.14 SCOP: b.86.1.2 All beta proteins    Hedgehog/intein (Hint) domain    Hedgehog/intein (Hint) domain    Intein (protein splicing domain)    VMA1-derived endonuclease (VDE) PI-Scei intein    Baker's yeast (Saccharomyces cerevisiae) SCOP: b.86.1.2 All beta proteins    Hedgehog/intein (Hint) domain    Hedgehog/intein (Hint) domain    Intein (protein splicing domain)    VMA1-derived endonuclease (VDE) PI-Scei intein    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.95.2.2 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Intein endonuclease    VMA1-derived endonuclease (VDE) PI-SceI    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.95.2.2 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Intein endonuclease    VMA1-derived endonuclease (VDE) PI-SceI    Baker's yeast (Saccharomyces cerevisiae) GO:  proton-transporting two-sector ATPase complex    ATP binding    DNA binding    endonuclease activity    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    ATP biosynthesis    ATP synthesis coupled proton transport    intein-mediated protein splicing    protein splicing    CHAIN: B SWISS-PROT/TREMBL: P17255    KEYWORD: 3D-structure    ATP synthesis    ATP-binding    Autocatalytic cleavage    DNA-binding    Endonuclease    Hydrogen ion transport    Hydrolase    Intron homing    Nuclease    Protein splicing    EC: 3.6.3.14 SCOP: b.86.1.2 All beta proteins    Hedgehog/intein (Hint) domain    Hedgehog/intein (Hint) domain    Intein (protein splicing domain)    VMA1-derived endonuclease (VDE) PI-Scei intein    Baker's yeast (Saccharomyces cerevisiae) SCOP: b.86.1.2 All beta proteins    Hedgehog/intein (Hint) domain    Hedgehog/intein (Hint) domain    Intein (protein splicing domain)    VMA1-derived endonuclease (VDE) PI-Scei intein    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.95.2.2 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Intein endonuclease    VMA1-derived endonuclease (VDE) PI-SceI    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.95.2.2 Alpha and beta proteins (a+b)    Homing endonuclease-like    Homing endonucleases    Intein endonuclease    VMA1-derived endonuclease (VDE) PI-SceI    Baker's yeast (Saccharomyces cerevisiae) GO:  proton-transporting two-sector ATPase complex    ATP binding    DNA binding    endonuclease activity    hydrogen-transporting ATP synthase activity, rotational mechanism    hydrogen-transporting ATPase activity, rotational mechanism    ATP biosynthesis    ATP synthesis coupled proton transport    intein-mediated protein splicing    protein splicing

Image Source: PDB

1dfa A - percentage of sequence identity: 100
1gpp A - percentage of sequence identity: 97
1jva A - percentage of sequence identity: 99