PDB: 1vi6 Compound: 30s ribosomal protein s2p Classification: RIBOSOME Entry date in PDB: 2003-12-30 Resolution [Å]: 1.95 R-Factor: 0.208

CHAIN: A SWISS-PROT/TREMBL: O29132    KEYWORD: Complete proteome    Ribosomal protein    SCOP: c.23.15.1 Alpha and beta proteins (a/b)    Flavodoxin-like    Ribosomal protein S2    Ribosomal protein S2    Ribosomal protein S2    Archaeon Archaeoglobus fulgidus GO:  intracellular    ribosome    small ribosomal subunit    structural constituent of ribosome    protein biosynthesis    CHAIN: B SWISS-PROT/TREMBL: O29132    KEYWORD: Complete proteome    Ribosomal protein    SCOP: c.23.15.1 Alpha and beta proteins (a/b)    Flavodoxin-like    Ribosomal protein S2    Ribosomal protein S2    Ribosomal protein S2    Archaeon Archaeoglobus fulgidus GO:  intracellular    ribosome    small ribosomal subunit    structural constituent of ribosome    protein biosynthesis    CHAIN: C SWISS-PROT/TREMBL: O29132    KEYWORD: Complete proteome    Ribosomal protein    SCOP: c.23.15.1 Alpha and beta proteins (a/b)    Flavodoxin-like    Ribosomal protein S2    Ribosomal protein S2    Ribosomal protein S2    Archaeon Archaeoglobus fulgidus GO:  intracellular    ribosome    small ribosomal subunit    structural constituent of ribosome    protein biosynthesis    CHAIN: D SWISS-PROT/TREMBL: O29132    KEYWORD: Complete proteome    Ribosomal protein    SCOP: c.23.15.1 Alpha and beta proteins (a/b)    Flavodoxin-like    Ribosomal protein S2    Ribosomal protein S2    Ribosomal protein S2    Archaeon Archaeoglobus fulgidus GO:  intracellular    ribosome    small ribosomal subunit    structural constituent of ribosome    protein biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1vi6_A_35 - HA => SUBCLASS : 3.1.1
1vi6_A_70 - EH => SUBCLASS : 2.1.27
1vi6_A_164 - HH => SUBCLASS : 7.2.2

Loops in ArchDB95 clusters

1vi6_A_70 - EH => SUBCLASS : 2.1.22
1vi6_A_80 - HE => SUBCLASS : 2.1.1
1vi6_A_127 - HE => SUBCLASS : 2.1.1
1vi6_A_48 - HE => SUBCLASS : 5.30.1
1vi6_A_35 - HA => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1vi6_A_93 - AR
1vi6_A_44 - EH
1vi6_A_117 - EH
1vi6_A_155 - EH
1vi6_A_140 - HA
1vi6_A_12 - HE

1vi5 A - percentage of sequence identity: 100
1vi5 B - percentage of sequence identity: 100
1vi5 C - percentage of sequence identity: 100
1vi5 D - percentage of sequence identity: 100
1vi6 A - percentage of sequence identity: 100
1vi6 B - percentage of sequence identity: 100
1vi6 C - percentage of sequence identity: 100
1vi6 D - percentage of sequence identity: 100