PDB: 1xgs Compound: methionine aminopeptidase Classification: AMINOPEPTIDASE Entry date in PDB: 1997-07-07 Resolution [Å]: 1.75 R-Factor: 0.187

CHAIN: A SWISS-PROT/TREMBL: P56218    KEYWORD: 3D-structure    Aminopeptidase    Cobalt    Complete proteome    Hydrolase    EC: 3.4.11.18 SCOP: a.4.5.25 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    Methionine aminopeptidase, insert domain    Methionine aminopeptidase, insert domain    Archaeon Pyrococcus furiosus SCOP: d.127.1.1 Alpha and beta proteins (a+b)    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Methionine aminopeptidase    Archaeon Pyrococcus furiosus SCOP: d.127.1.1 Alpha and beta proteins (a+b)    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Methionine aminopeptidase    Archaeon Pyrococcus furiosus GO:  metalloexopeptidase activity    methionyl aminopeptidase activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P56218    KEYWORD: 3D-structure    Aminopeptidase    Cobalt    Complete proteome    Hydrolase    EC: 3.4.11.18 SCOP: a.4.5.25 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    Methionine aminopeptidase, insert domain    Methionine aminopeptidase, insert domain    Archaeon Pyrococcus furiosus SCOP: d.127.1.1 Alpha and beta proteins (a+b)    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Methionine aminopeptidase    Archaeon Pyrococcus furiosus SCOP: d.127.1.1 Alpha and beta proteins (a+b)    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Creatinase/aminopeptidase    Methionine aminopeptidase    Archaeon Pyrococcus furiosus GO:  metalloexopeptidase activity    methionyl aminopeptidase activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1xgs_A_30 - HE => SUBCLASS : 1.1.3
1xgs_A_129 - HE => SUBCLASS : 1.1.6
1xgs_A_30 - HE => SUBCLASS : 1.1.6
1xgs_A_129 - HE => SUBCLASS : 1.1.7
1xgs_A_129 - HE => SUBCLASS : 2.2.2
1xgs_A_30 - HE => SUBCLASS : 2.2.3
1xgs_A_246 - HE => SUBCLASS : 2.4.1
1xgs_A_217 - HE => SUBCLASS : 4.49.1
1xgs_A_78 - HA => SUBCLASS : 2.1.1
1xgs_A_281 - HA => SUBCLASS : 2.2.1
1xgs_A_47 - AR => SUBCLASS : 3.2.2
1xgs_A_145 - AR => SUBCLASS : 4.3.3
1xgs_A_3 - HH => SUBCLASS : 6.1.2
1xgs_A_106 - HH => SUBCLASS : 6.1.2

Loops in ArchDB95 clusters

1xgs_A_47 - AR => SUBCLASS : 3.1.4
1xgs_A_145 - AR => SUBCLASS : 4.6.2
1xgs_A_262 - AR => SUBCLASS : 5.78.1
1xgs_A_3 - HH => SUBCLASS : 6.2.1
1xgs_A_106 - HH => SUBCLASS : 6.2.1
1xgs_A_129 - HE => SUBCLASS : 1.1.1
1xgs_A_129 - HE => SUBCLASS : 1.2.2
1xgs_A_30 - HE => SUBCLASS : 1.2.2
1xgs_A_30 - HE => SUBCLASS : 2.1.4
1xgs_A_246 - HE => SUBCLASS : 2.4.1
1xgs_A_30 - HE => SUBCLASS : 2.5.1
1xgs_A_217 - HE => SUBCLASS : 3.24.1
1xgs_A_217 - HE => SUBCLASS : 4.26.1
1xgs_A_78 - HA => SUBCLASS : 2.1.1
1xgs_A_281 - HA => SUBCLASS : 2.2.1
1xgs_A_53 - HA => SUBCLASS : 2.3.17
1xgs_A_281 - HA => SUBCLASS : 3.1.1

Loops in ArchDB-EC clusters

1xgs_A_3 - HH => SUBCLASS : 6.2.2

Loops not clustered in ArchDB

1xgs_A_165 - AR
1xgs_A_183 - AR
1xgs_A_145 - AR
1xgs_A_189 - AR
1xgs_A_59 - AR
1xgs_A_262 - AR
1xgs_A_47 - AR
1xgs_A_276 - AR
1xgs_A_189 - AR
1xgs_A_183 - AR
1xgs_A_165 - AR
1xgs_A_276 - AR
1xgs_A_59 - AR
1xgs_A_235 - EH
1xgs_A_197 - EH
1xgs_A_90 - EH
1xgs_A_152 - HA
1xgs_A_78 - HA
1xgs_A_53 - HA
1xgs_A_152 - HA
1xgs_A_281 - HA

1wkm A - percentage of sequence identity: 100
1wkm B - percentage of sequence identity: 100
1xgm A - percentage of sequence identity: 100
1xgm B - percentage of sequence identity: 100
1xgn A - percentage of sequence identity: 100
1xgn B - percentage of sequence identity: 100
1xgo - - percentage of sequence identity: 100
1xgs A - percentage of sequence identity: 100
1xgs B - percentage of sequence identity: 100