PDB: 1xkb Compound: blood coagulation factor xa Classification: BLOOD COAGULATION FACTOR Entry date in PDB: 1999-03-23 Resolution [Å]: 2.40 R-Factor: 0.206

CHAIN: A SWISS-PROT/TREMBL: P00742    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Hydroxylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen    EC: 3.4.21.6 SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Factor X, N-terminal module    Human (Homo sapiens) SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Factor X, N-terminal module    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis    CHAIN: B SWISS-PROT/TREMBL: P00742    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Hydroxylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen    EC: 3.4.21.6 SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Factor X, N-terminal module    Human (Homo sapiens) SCOP: g.3.11.1 Small proteins    Knottins (small inhibitors, toxins, lectins)    EGF/Laminin    EGF-type module    Factor X, N-terminal module    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis    CHAIN: C SWISS-PROT/TREMBL: P00742    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Hydroxylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen    EC: 3.4.21.6 SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Coagulation factor Xa, protease domain    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis    CHAIN: D SWISS-PROT/TREMBL: P00742    KEYWORD: 3D-structure    Blood coagulation    Calcium-binding    EGF-like domain    Gamma-carboxyglutamic acid    Glycoprotein    Hydrolase    Hydroxylation    Plasma    Polymorphism    Repeat    Serine protease    Signal    Vitamin K    Zymogen    EC: 3.4.21.6 SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Coagulation factor Xa, protease domain    Human (Homo sapiens) GO:  extracellular region    calcium ion binding    chymotrypsin activity    trypsin activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1xkb_A_70 - AR => SUBCLASS : 4.17.2
1xkb_A_99 - HA => SUBCLASS : 2.1.1
1xkb_A_76 - HA => SUBCLASS : 5.14.1

Loops not clustered in ArchDB

1xkb_A_60 - AR
1xkb_A_83 - AR
1xkb_A_107 - AR
1xkb_A_115 - HA

1apo - - percentage of sequence identity: 78
1bf9 - - percentage of sequence identity: 67
1c5m F - percentage of sequence identity: 100
1ccf - - percentage of sequence identity: 78
1edm B - percentage of sequence identity: 65
1edm C - percentage of sequence identity: 65
1ezq B - percentage of sequence identity: 100
1f0r B - percentage of sequence identity: 100
1f0s B - percentage of sequence identity: 100
1f7e A - percentage of sequence identity: 67
1f7m A - percentage of sequence identity: 67
1fax L - percentage of sequence identity: 98
1ff7 A - percentage of sequence identity: 67
1ffm A - percentage of sequence identity: 67
1fjs L - percentage of sequence identity: 100
1fxy A - percentage of sequence identity: 65
1g2l B - percentage of sequence identity: 100
1g2m B - percentage of sequence identity: 100
1hcg B - percentage of sequence identity: 100
1ioe L - percentage of sequence identity: 100
1iqe L - percentage of sequence identity: 100
1iqf L - percentage of sequence identity: 100
1iqg L - percentage of sequence identity: 100
1iqh L - percentage of sequence identity: 100
1iqi L - percentage of sequence identity: 100
1iqj L - percentage of sequence identity: 100
1iqk L - percentage of sequence identity: 100
1iql L - percentage of sequence identity: 100
1iqm L - percentage of sequence identity: 100
1iqn L - percentage of sequence identity: 100
1ixa - - percentage of sequence identity: 65
1kig H - percentage of sequence identity: 84
1kig L - percentage of sequence identity: 60
1ksn B - percentage of sequence identity: 100
1kye B - percentage of sequence identity: 100
1lpg A - percentage of sequence identity: 100
1lpk A - percentage of sequence identity: 100
1lpz A - percentage of sequence identity: 100
1lqd A - percentage of sequence identity: 100
1mq5 L - percentage of sequence identity: 100
1mq6 L - percentage of sequence identity: 100
1nfu B - percentage of sequence identity: 100
1nfw B - percentage of sequence identity: 100
1nfx B - percentage of sequence identity: 100
1nfy B - percentage of sequence identity: 100
1p0s L - percentage of sequence identity: 100
1v3x B - percentage of sequence identity: 100
1whe - - percentage of sequence identity: 78
1whf - - percentage of sequence identity: 78
1wu1 B - percentage of sequence identity: 100
1xka L - percentage of sequence identity: 100
1xkb A - percentage of sequence identity: 100
1xkb B - percentage of sequence identity: 100
2bok L - percentage of sequence identity: 100