PDB: 2gac Compound: glycosylasparaginase Classification: HYDROLASE Entry date in PDB: 1999-06-08 Resolution [Å]: 2.10 R-Factor: 0.233

CHAIN: A SWISS-PROT/TREMBL: Q47898    KEYWORD: 3D-structure    Hydrolase    Periplasmic    Signal    EC: 3.5.1.26 SCOP: d.153.1.5 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    (Glycosyl)asparaginase    Glycosylasparaginase (aspartylglucosaminidase, AGA)    Flavobacterium meningosepticum GO:  asparaginase activity    glycoprotein catabolism    CHAIN: B SWISS-PROT/TREMBL: Q47898    KEYWORD: 3D-structure    Hydrolase    Periplasmic    Signal    EC: 3.5.1.26 SCOP: d.153.1.5 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    (Glycosyl)asparaginase    Glycosylasparaginase (aspartylglucosaminidase, AGA)    Flavobacterium meningosepticum GO:  asparaginase activity    glycoprotein catabolism    CHAIN: C SWISS-PROT/TREMBL: Q47898    KEYWORD: 3D-structure    Hydrolase    Periplasmic    Signal    EC: 3.5.1.26 SCOP: d.153.1.5 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    (Glycosyl)asparaginase    Glycosylasparaginase (aspartylglucosaminidase, AGA)    Flavobacterium meningosepticum GO:  asparaginase activity    glycoprotein catabolism    CHAIN: D SWISS-PROT/TREMBL: Q47898    KEYWORD: 3D-structure    Hydrolase    Periplasmic    Signal    EC: 3.5.1.26 SCOP: d.153.1.5 Alpha and beta proteins (a+b)    Ntn hydrolase-like    N-terminal nucleophile aminohydrolases (Ntn hydrolases)    (Glycosyl)asparaginase    Glycosylasparaginase (aspartylglucosaminidase, AGA)    Flavobacterium meningosepticum GO:  asparaginase activity    glycoprotein catabolism

Image Source: PDB

Loops in ArchDB40 clusters

2gac_B_228 - HE => SUBCLASS : 6.4.2
2gac_B_277 - HA => SUBCLASS : 2.2.2
2gac_A_65 - HA => SUBCLASS : 3.1.1
2gac_B_153 - HA => SUBCLASS : 3.1.1
2gac_B_191 - HA => SUBCLASS : 3.2.2
2gac_B_255 - HA => SUBCLASS : 4.2.1
2gac_B_198 - EH => SUBCLASS : 1.1.32
2gac_B_214 - HH => SUBCLASS : 3.3.1
2gac_A_13 - HH => SUBCLASS : 3.3.1
2gac_A_13 - HH => SUBCLASS : 3.3.2

Loops in ArchDB95 clusters

2gac_B_198 - EH => SUBCLASS : 1.1.30
2gac_A_76 - EH => SUBCLASS : 3.19.2
2gac_A_13 - HH => SUBCLASS : 3.2.1
2gac_B_214 - HH => SUBCLASS : 3.2.1
2gac_A_88 - HE => SUBCLASS : 4.44.1
2gac_B_228 - HE => SUBCLASS : 6.1.2
2gac_B_228 - HE => SUBCLASS : 9.9.1
2gac_B_277 - HA => SUBCLASS : 2.2.2
2gac_A_65 - HA => SUBCLASS : 3.1.1
2gac_B_153 - HA => SUBCLASS : 3.1.1
2gac_B_255 - HA => SUBCLASS : 3.1.2
2gac_B_191 - HA => SUBCLASS : 3.3.3

Loops not clustered in ArchDB

2gac_B_164 - AR
2gac_B_266 - AR
2gac_A_103 - EH
2gac_A_31 - HE
2gac_A_106 - HH
2gac_B_206 - HH

1ayy B - percentage of sequence identity: 100
1ayy D - percentage of sequence identity: 100
1p4k A - percentage of sequence identity: 100
1p4k C - percentage of sequence identity: 100
1p4v A - percentage of sequence identity: 100
1p4v C - percentage of sequence identity: 100
2gac B - percentage of sequence identity: 100
2gac D - percentage of sequence identity: 100
2gaw B - percentage of sequence identity: 100
2gaw D - percentage of sequence identity: 100
9gaa A - percentage of sequence identity: 100
9gaa C - percentage of sequence identity: 100
9gac A - percentage of sequence identity: 100
9gac C - percentage of sequence identity: 100
9gaf A - percentage of sequence identity: 100
9gaf C - percentage of sequence identity: 100