PDB: 2tmg Compound: glutamate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 1999-12-08 Resolution [Å]: 2.90 R-Factor: 0.211

CHAIN: A SWISS-PROT/TREMBL: P96110    KEYWORD: 3D-structure    Complete proteome    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Thermotoga maritima SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Thermotoga maritima GO:  oxidoreductase activity    amino acid metabolism    CHAIN: B SWISS-PROT/TREMBL: P96110    KEYWORD: 3D-structure    Complete proteome    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Thermotoga maritima SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Thermotoga maritima GO:  oxidoreductase activity    amino acid metabolism    CHAIN: C SWISS-PROT/TREMBL: P96110    KEYWORD: 3D-structure    Complete proteome    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Thermotoga maritima SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Thermotoga maritima GO:  oxidoreductase activity    amino acid metabolism    CHAIN: D SWISS-PROT/TREMBL: P96110    KEYWORD: 3D-structure    Complete proteome    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Thermotoga maritima SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Thermotoga maritima GO:  oxidoreductase activity    amino acid metabolism    CHAIN: E SWISS-PROT/TREMBL: P96110    KEYWORD: 3D-structure    Complete proteome    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Thermotoga maritima SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Thermotoga maritima GO:  oxidoreductase activity    amino acid metabolism    CHAIN: F SWISS-PROT/TREMBL: P96110    KEYWORD: 3D-structure    Complete proteome    NAD    NADP    Oxidoreductase    EC: 1.4.1.3 SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Glutamate dehydrogenase    Thermotoga maritima SCOP: c.58.1.1 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenases    Glutamate dehydrogenase    Thermotoga maritima GO:  oxidoreductase activity    amino acid metabolism

Image Source: PDB

Loops in ArchDB-EC clusters

2tmg_A_343 - HH => SUBCLASS : 5.1.1

Loops not clustered in ArchDB

2tmg_A_50 - AR
2tmg_A_67 - AR
2tmg_A_71 - EH
2tmg_A_333 - EH
2tmg_A_310 - EH
2tmg_A_288 - EH
2tmg_A_274 - EH
2tmg_A_245 - EH
2tmg_A_211 - EH
2tmg_A_139 - EH
2tmg_A_102 - EH
2tmg_A_35 - HA
2tmg_A_235 - HA
2tmg_A_187 - HE
2tmg_A_24 - HE
2tmg_A_79 - HE
2tmg_A_116 - HE
2tmg_A_219 - HE
2tmg_A_321 - HE
2tmg_A_300 - HE
2tmg_A_278 - HE
2tmg_A_254 - HE
2tmg_A_5 - HH
2tmg_A_337 - HH
2tmg_A_363 - HH
2tmg_A_149 - HH

1b26 A - percentage of sequence identity: 99
1b26 B - percentage of sequence identity: 99
1b26 C - percentage of sequence identity: 99
1b26 D - percentage of sequence identity: 99
1b26 E - percentage of sequence identity: 99
1b26 F - percentage of sequence identity: 99
1b3b A - percentage of sequence identity: 98
1b3b B - percentage of sequence identity: 98
1b3b C - percentage of sequence identity: 98
1b3b D - percentage of sequence identity: 98
1b3b E - percentage of sequence identity: 98
1b3b F - percentage of sequence identity: 98
2tmg A - percentage of sequence identity: 100
2tmg B - percentage of sequence identity: 100
2tmg C - percentage of sequence identity: 100
2tmg D - percentage of sequence identity: 100
2tmg E - percentage of sequence identity: 100
2tmg F - percentage of sequence identity: 100