Logo
Information on 3pvi
PDB: 3pvi
Compound: pvuii endonuclease
Classification: HYDROLASE/DNA
Entry date in PDB: 1998-10-14
Resolution [Å]: 1.59
R-Factor: 0.205


CHAIN: A
SWISS-PROT/TREMBL: P23657
   KEYWORD: 3D-structure    Endonuclease    Hydrolase    Magnesium    Metal-binding    Nuclease    Restriction system   
EC: 3.1.21.4
SCOP: c.52.1.6 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    Restriction endonuclease PvuII    Restriction endonuclease PvuII    Proteus vulgaris
GO:  


CHAIN: B
SWISS-PROT/TREMBL: P23657
   KEYWORD: 3D-structure    Endonuclease    Hydrolase    Magnesium    Metal-binding    Nuclease    Restriction system   
EC: 3.1.21.4
SCOP: c.52.1.6 Alpha and beta proteins (a/b)    Restriction endonuclease-like    Restriction endonuclease-like    Restriction endonuclease PvuII    Restriction endonuclease PvuII    Proteus vulgaris
GO:  
3pvi Image
Image Source: PDB

Stored Loops of 3pvi

Loops in ArchDB40 clusters

3pvi_A_146 - HE => SUBCLASS : 0.1.1
3pvi_A_88 - HE => SUBCLASS : 0.1.11
3pvi_A_88 - HE => SUBCLASS : 2.8.6
3pvi_A_59 - HA => SUBCLASS : 3.1.1
3pvi_A_59 - HA => SUBCLASS : 5.1.7
3pvi_A_108 - EH => SUBCLASS : 1.1.3

Loops in ArchDB95 clusters

3pvi_A_108 - EH => SUBCLASS : 1.1.4
3pvi_A_66 - AR => SUBCLASS : 5.39.1
3pvi_A_146 - HE => SUBCLASS : 0.1.1
3pvi_A_88 - HE => SUBCLASS : 0.1.9
3pvi_A_59 - HA => SUBCLASS : 4.11.1
3pvi_A_59 - HA => SUBCLASS : 5.4.1
3pvi_A_59 - HA => SUBCLASS : 5.4.5

Loops in ArchDB-EC clusters

3pvi_A_88 - HE => SUBCLASS : 2.5.2

Loops not clustered in ArchDB

3pvi_A_66 - AR
3pvi_A_79 - EH
3pvi_A_144 - EH
3pvi_A_99 - HA
3pvi_A_59 - HA
3pvi_A_99 - HA
3pvi_A_36 - HE
3pvi_A_117 - HE
3pvi_A_6 - HH

Homologous structures to 3pvi classified in ArchDB

1eyu A - percentage of sequence identity: 99
1eyu B - percentage of sequence identity: 99
1f0o A - percentage of sequence identity: 99
1f0o B - percentage of sequence identity: 99
1h56 A - percentage of sequence identity: 99
1h56 B - percentage of sequence identity: 99
1k0z A - percentage of sequence identity: 99
1k0z B - percentage of sequence identity: 99
1ni0 A - percentage of sequence identity: 98
1ni0 B - percentage of sequence identity: 98
1ni0 C - percentage of sequence identity: 98
1pvi A - percentage of sequence identity: 99
1pvi B - percentage of sequence identity: 99
1pvu A - percentage of sequence identity: 99
1pvu B - percentage of sequence identity: 99
2pvi A - percentage of sequence identity: 98
2pvi B - percentage of sequence identity: 98
3pvi A - percentage of sequence identity: 100
3pvi B - percentage of sequence identity: 100