PDB: 3ygs Compound: apoptotic protease activating factor 1 Classification: APOPTOSIS Entry date in PDB: 2000-04-19 Resolution [Å]: 2.50 R-Factor: 0.224

CHAIN: P SWISS-PROT/TREMBL: P55211    KEYWORD: 3D-structure    Alternative splicing    Apoptosis    Hydrolase    Polymorphism    Thiol protease    Zymogen    EC: 3.4.22.- SCOP: a.77.1.3 All alpha proteins    DEATH domain    DEATH domain    Caspase recruitment domain, CARD    Procaspase 9 prodomain    Human (Homo sapiens) GO:  intracellular    caspase activity    protein binding    proteolysis and peptidolysis    regulation of apoptosis

Image Source: PDB

Loops in ArchDB40 clusters

3ygs_P_70 - HH => SUBCLASS : 2.2.1
3ygs_P_70 - HH => SUBCLASS : 2.2.2
3ygs_P_27 - HH => SUBCLASS : 4.1.1

Loops in ArchDB95 clusters

3ygs_P_70 - HH => SUBCLASS : 2.2.1
3ygs_P_70 - HH => SUBCLASS : 2.2.8
3ygs_P_27 - HH => SUBCLASS : 4.1.1

Loops in ArchDB-EC clusters

3ygs_P_27 - HH => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

3ygs_P_4 - HH
3ygs_P_14 - HH
3ygs_P_38 - HH
3ygs_P_52 - HH

1cy5 A - percentage of sequence identity: 100