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Information on SUBCLASS 12.1.1
Subclass Accession number: 6919
Subclass: 12.1.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 54.3 +/- 24.5
Average RMSD (Å) : 0.317 +/- 0.075

Consensus geometry
d (Å): 19 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XFGhIDpppYTGShph
(φψ)-conformation: bblbbbaaabbebpbb
Pattern: [tv][VY]x[FL][G][FGY][IY][D][DST][ST][ky][FY][KT][G][S][IL][NT][TWY][TV][ADGP]
Conservation:-1.0430.073-1.5480.2291.758-0.888-0.3891.758-0.578-0.048-1.1111.277-0.2581.7580.6510.1100.007-0.265-0.321-1.172
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bxo_A_1631bxo   A164183VYDFGFIDSSKYTGSLTYTGEEEESS--GGGBSS--EEEEbbxbvbbxaaabxebxbxbx
1ibq_A_1601ibq   A163182VYDFGYIDDSKYTGSITYTDEEEESS--GGGBSS--EEEEbbbbvbbxaaabbexxbbbx
1oew_A_1661oew   A167186TYNFGFIDTTAYTGSITYTAEEEES---TTSSSS--EEEEbbbbvbbxaaabbebxbxbx
1qrp_E_1641qrp   E164183VVIFGGIDSSYYTGSLNWVPEEEET---GGGBSS--EEEEbbbxvebbaaabbebpxxbx
2apr_*_1672apr   -168187EYIFGGYDSTKFKGSLTTVPEEEET---GGGB-S--EEEEbbbxvbbbaaabbexxbxbx
4pep_*_1634pep   -164183VVLLGGIDSSYYTGSLNWVPEEEET---TTSB-S--EEEEbbbxvbbbaaabbebxbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bxo_A_1631bxo   A     MANALPHA-D-MANNOSE G - 163
1bxo_A_1631bxo   A     MANALPHA-D-MANNOSE V - 164
1bxo_A_1631bxo   A     MANALPHA-D-MANNOSE F - 167
1bxo_A_1631bxo   A     MANALPHA-D-MANNOSE G - 168
1bxo_A_1631bxo   A     MANALPHA-D-MANNOSE F - 169
1bxo_A_1631bxo   A     GOLGLYCEROL S - 172
1bxo_A_1631bxo   A     GOLGLYCEROL Y - 175
1bxo_A_1631bxo   A     GOLGLYCEROL G - 177
1bxo_A_1631bxo   A     GOLGLYCEROL S - 178
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oew_A_1661oew   A AC4SO4 BINDING SITE FOR CHAIN AY - 178
1oew_A_1661oew   A AC4SO4 BINDING SITE FOR CHAIN AS - 181
1oew_A_1661oew   A AC4SO4 BINDING SITE FOR CHAIN AI - 182

Clusters included in this Subclass
CLUSTER: AR.11.1