Home

Classification

Query

Statistics

Contact

Links

Help

PDB code:

Information on SUBCLASS 18.1.1

Subclass Accession number: 4324 Subclass: 18.1.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 7 Average sequence ID (%) : 30.3 +/- 26.6 Average RMSD (Å) : 0.571 +/- 0.095 Consensus geometry d (Å): 15 delta (°): 90-135 theta (°): 0-45 rho (°): 180-225

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1azs_C_217	1azs	C	217	249	VNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVA	EEEEEEEE--SGGGGGGGGGGTTT--EEEEEEE	xxbbxbbbxaxaaaaaaaaaaaxvxabxbxbbx
1cip_A_194	1cip	A	194	226	LHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVA	EEEEEEEE--SGGGGGGGGGG-TT-SEEEEEEE	bxxbxbbbxaxaaaaaaaaaaaxlxabbbxxbx
1kmq_A_51	1kmq	A	53	85	VELALWDTAGLEDYDRLRPLSYPDTDVILMCFS	EEEEEEEE--SGGGTTTGGGG-TT-SEEEEEEE	bbxxbbxbxaxaaaaaaaaaaaplxabbxbbbb
1m2o_B_67	1m2o	B	67	99	IKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVD	EEEEEEE---SGGGTTSGGGG-TT--EEEEEEE	bbbxbbbbxaxaaaaaaaaaaaplxabbbbxbx
1m7b_A_70	1m7b	A	71	103	IELSLWDTSGSPYYDNVRPLSYPDSDAVLICFD	EEEEEEEE--SGGGTTTGGGG-TT-SEEEEEEE	xxbbbbxbxaxaaaaaaaaaaapvxabbbxbbb
1upt_A_61	1upt	A	61	93	LKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVD	EEEEEEEE---GGGGGGGGGG-TT-SEEEEEEE	xbbxbbxxpapaaaaaaaaaaaplxabbxbxbx
2ngr_A_49	2ngr	A	51	83	YTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFS	EEEEEEEE--SGGGTTTGGGG-TT-SEEEEEEE	bbxxbxbbxaxaaaaaaaaaaapvxabbbxbbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1azs_C_217	1azs	C	GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE	D - 223
1azs_C_217	1azs	C	MGMAGNESIUM ION	D - 223
1azs_C_217	1azs	C	GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE	V - 224
1azs_C_217	1azs	C	MGMAGNESIUM ION	V - 224
1azs_C_217	1azs	C	GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE	G - 225
1azs_C_217	1azs	C	MGMAGNESIUM ION	G - 225
1azs_C_217	1azs	C	GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE	G - 226
1azs_C_217	1azs	C	GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE	Q - 227
1azs_C_217	1azs	C	GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE	V - 247
1cip_A_194	1cip	A	MGMAGNESIUM ION	D - 200
1cip_A_194	1cip	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 200
1cip_A_194	1cip	A	MGMAGNESIUM ION	V - 201
1cip_A_194	1cip	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	V - 201
1cip_A_194	1cip	A	MGMAGNESIUM ION	G - 202
1cip_A_194	1cip	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	G - 202
1cip_A_194	1cip	A	MGMAGNESIUM ION	G - 203
1cip_A_194	1cip	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	G - 203
1cip_A_194	1cip	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	Q - 204
1cip_A_194	1cip	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	C - 224
1kmq_A_51	1kmq	A	DOXDIOXANE	W - 58
1kmq_A_51	1kmq	A	MGMAGNESIUM ION	D - 59
1kmq_A_51	1kmq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 59
1kmq_A_51	1kmq	A	MGMAGNESIUM ION	T - 60
1kmq_A_51	1kmq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	T - 60
1kmq_A_51	1kmq	A	MGMAGNESIUM ION	A - 61
1kmq_A_51	1kmq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	A - 61
1kmq_A_51	1kmq	A	MGMAGNESIUM ION	G - 62
1kmq_A_51	1kmq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	G - 62
1kmq_A_51	1kmq	A	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	L - 63
1kmq_A_51	1kmq	A	DOXDIOXANE	L - 69
1kmq_A_51	1kmq	A	DOXDIOXANE	L - 72
1kmq_A_51	1kmq	A	DOXDIOXANE	S - 73
1m2o_B_67	1m2o	B	MGMAGNESIUM ION	D - 73
1m2o_B_67	1m2o	B	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	D - 73
1m2o_B_67	1m2o	B	MGMAGNESIUM ION	L - 74
1m2o_B_67	1m2o	B	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	L - 74
1m2o_B_67	1m2o	B	MGMAGNESIUM ION	G - 75
1m2o_B_67	1m2o	B	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	G - 75
1m2o_B_67	1m2o	B	MGMAGNESIUM ION	G - 76
1m2o_B_67	1m2o	B	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	G - 76
1m2o_B_67	1m2o	B	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	H - 77
1m2o_B_67	1m2o	B	GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER	L - 97
1m7b_A_70	1m7b	A	MGMAGNESIUM ION	D - 77
1m7b_A_70	1m7b	A	GTPGUANOSINE-5'-TRIPHOSPHATE	D - 77
1m7b_A_70	1m7b	A	MGMAGNESIUM ION	T - 78
1m7b_A_70	1m7b	A	GTPGUANOSINE-5'-TRIPHOSPHATE	T - 78
1m7b_A_70	1m7b	A	GTPGUANOSINE-5'-TRIPHOSPHATE	S - 79
1m7b_A_70	1m7b	A	GTPGUANOSINE-5'-TRIPHOSPHATE	G - 80
1m7b_A_70	1m7b	A	GTPGUANOSINE-5'-TRIPHOSPHATE	S - 81
1upt_A_61	1upt	A	MSESELENOMETHIONINE	L - 61
1upt_A_61	1upt	A	MSESELENOMETHIONINE	K - 62
1upt_A_61	1upt	A	MSESELENOMETHIONINE	F - 63
1upt_A_61	1upt	A	MSESELENOMETHIONINE	Q - 64
1upt_A_61	1upt	A	MSESELENOMETHIONINE	V - 65
1upt_A_61	1upt	A	MSESELENOMETHIONINE	W - 66
1upt_A_61	1upt	A	GTPGUANOSINE-5'-TRIPHOSPHATE	D - 67
1upt_A_61	1upt	A	MGMAGNESIUM ION	D - 67
1upt_A_61	1upt	A	GTPGUANOSINE-5'-TRIPHOSPHATE	L - 68
1upt_A_61	1upt	A	MGMAGNESIUM ION	L - 68
1upt_A_61	1upt	A	GTPGUANOSINE-5'-TRIPHOSPHATE	G - 69
1upt_A_61	1upt	A	MGMAGNESIUM ION	G - 69
1upt_A_61	1upt	A	GTPGUANOSINE-5'-TRIPHOSPHATE	G - 70
1upt_A_61	1upt	A	MGMAGNESIUM ION	G - 70
1upt_A_61	1upt	A	GTPGUANOSINE-5'-TRIPHOSPHATE	L - 71
1upt_A_61	1upt	A	MSESELENOMETHIONINE	W - 78
1upt_A_61	1upt	A	MSESELENOMETHIONINE	Y - 81
1upt_A_61	1upt	A	MSESELENOMETHIONINE	Y - 82
1upt_A_61	1upt	A	MSESELENOMETHIONINE	D - 86
1upt_A_61	1upt	A	MSESELENOMETHIONINE	V - 88
1upt_A_61	1upt	A	MSESELENOMETHIONINE	I - 89
1upt_A_61	1upt	A	MSESELENOMETHIONINE	Y - 90
1upt_A_61	1upt	A	GTPGUANOSINE-5'-TRIPHOSPHATE	V - 91
1upt_A_61	1upt	A	MSESELENOMETHIONINE	V - 92
1upt_A_61	1upt	A	MSESELENOMETHIONINE	D - 93
2ngr_A_49	2ngr	A	MGMAGNESIUM ION	D - 57
2ngr_A_49	2ngr	A	GDPGUANOSINE-5'-DIPHOSPHATE	D - 57
2ngr_A_49	2ngr	A	AF3ALUMINUM FLUORIDE	D - 57
2ngr_A_49	2ngr	A	MGMAGNESIUM ION	T - 58
2ngr_A_49	2ngr	A	GDPGUANOSINE-5'-DIPHOSPHATE	T - 58
2ngr_A_49	2ngr	A	AF3ALUMINUM FLUORIDE	T - 58
2ngr_A_49	2ngr	A	AF3ALUMINUM FLUORIDE	A - 59
2ngr_A_49	2ngr	A	GDPGUANOSINE-5'-DIPHOSPHATE	G - 60
2ngr_A_49	2ngr	A	AF3ALUMINUM FLUORIDE	G - 60
2ngr_A_49	2ngr	A	GDPGUANOSINE-5'-DIPHOSPHATE	Q - 61
2ngr_A_49	2ngr	A	AF3ALUMINUM FLUORIDE	Q - 61

Clusters included in this Subclass

CLUSTER: AR.17.2

CLUSTER: AR.18.13

For any comment or web-related incidence, send an email to the webmaster.