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Information on SUBCLASS 3.8.4
Subclass Accession number: 3823
Subclass: 3.8.4 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 21.1 +/- 18.2
Average RMSD (Å) : 0.780 +/- 0.084

Consensus geometry
d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: hpXPpXh
(φψ)-conformation: bbppabb
Pattern: [gi][aet][fi][HSTWY][fkq][P][fty][FGKM][fivy]
Conservation:-0.689-0.2150.034-0.238-0.4092.608-0.266-0.550-0.274
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dqs_A_1601dqs   A165173GAIWQPTKIEEE---SEEebxbxxabb
1ii5_A_851ii5   A8593ITFTQPYFSEEE----EEbbxxxxabb
1noy_A_261noy   A3038EVEYLPTMFEEE---SEExbxbbxabb
1pb7_A_1351pb7   A135143IEFSKPFKYEEE-S-SEEbbbxxpabb
1ujn_A_1391ujn   A144152GAFHFPQGVEEE---SEEbbxbxxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dqs_A_1601dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 161
1dqs_A_1601dqs   A     CRB[1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID K - 161
1dqs_A_1601dqs   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE N - 162
1dqs_A_1601dqs   A     CRB[1R-(1ALPHA,3BETA,4ALPHA,5BETA)]-5-(PHOSPHONOMETHYL)-1,3,4-TRIHYDROXYCYCLOHEXANE-1-CARBOXYLIC ACID N - 162
1ii5_A_851ii5   A     GLUGLUTAMIC ACID I - 96
1pb7_A_1351pb7   A     GLYGLYCINE Q - 144

Clusters included in this Subclass
CLUSTER: AR.3.135