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Information on SUBCLASS 3.9.1
Subclass Accession number: 3828
Subclass: 3.9.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 23

Average sequence ID (%) : 11.3 +/- 14.5
Average RMSD (Å) : 0.804 +/- 0.140

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbapabb
Pattern: [afgiklv]x[agnpstv][adegknqrst]x[ADEGNPQ]xxxx
Conservation:1.406-1.1911.4170.010-0.3791.246-1.003-0.691-0.202-0.613
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ahs_A_2311ahs   A233242VGNPGARRSIEEE-SSS-EEbbbaxabxbb
1aun_*_31aun   -615VHNNCPYTVWEEE-SSS-EEbbbaxaxxbx
1du5_A_21du5   A514VVNQCPFTVWEEE-SSS-EEbbxaxabxbb
1euw_A_961euw   A101110VWNRGQDSFTEEE-SSS-EEbbxababpbb
1gef_A_421gef   A4857KVTKKDHLYVEEESSS-EEEbbbaxabbxb
1gpr_*_411gpr   -4553ILPSEGIVV.EEESS-EEE.bxxababbb.
1iby_A_471iby   A5261VENKSPISEGEEE-SSS-EEbbxaxabpbb
1ifr_A_4511ifr   A454463LRNKSNEDQSEEE-SSS-EEbbxaxabxbx
1j83_A_11881j83   A11901199VGSNSDNISLEEES-SEEEEbbbababbbb
1khx_A_2901khx   A290299FHASQPSLTVEEE-SSEEEEbbxababbbb
1lur_A_12561lur   A12601269ITTSYPVIHLEEESSSEEEEbbbaxabbxb
1m53_A_5431m53   A548557VVNFKEYPVREEE-SSS-EEbbxaxabwbb
1m7x_A_6501m7x   A654663ASNFTPVPRHEEE-SS--EEbbbabaxwbb
1msp_A_291msp   A3342ITNAGGRRIGEEE-SSS-EEbbxababpbb
1nsz_A_2651nsz   A269278VFTDQPSIVIEEESSSEEEEbbbaxabbxb
1nzi_A_821nzi   A8493FQVPYNKLQVEEESSSEEEEbbbababbbb
1ok0_A_201ok0   A2332ADNGCAETVTEEE-SSS-EEbbxaxabpbb
1row_A_171row   A2332LVNGGAEKIVEEE-SSS-EExbbaxabxbb
1snz_A_2671snz   A271280VYTTQPGVQFEEESSSEEEEbbbaxabbxb
1vk3_A_3071vk3   A313321EVIEEPVYR.EEESS-EEE.bxbaxabbb.
2apr_*_2892apr   -290299GYGNWGFAIIEEESSSSEEEbbbababxbx
2f3g_A_482f3g   A5260IKPTGNKMV.EEE-SSEEE.bxxaxabbb.
2gpr_*_412gpr   -4553INPKSNDFH.EEESSSEEE.bxpaxaxbb.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1euw_A_961euw   A     EMCETHYL MERCURY ION Q - 96
1euw_A_961euw   A     GOLGLYCEROL Q - 96
1euw_A_961euw   A     GOLGLYCEROL L - 97
1euw_A_961euw   A     GOLGLYCEROL M - 98
1euw_A_961euw   A     GOLGLYCEROL I - 99
1euw_A_961euw   A     GOLGLYCEROL S - 100
1iby_A_471iby   A     HEZHEXANE-1,6-DIOL S - 56
1iby_A_471iby   A     HEZHEXANE-1,6-DIOL I - 58
1iby_A_471iby   A     CUCOPPER (II) ION S - 59
1iby_A_471iby   A     HEZHEXANE-1,6-DIOL S - 59
1iby_A_471iby   A     CUCOPPER (II) ION E - 60
1iby_A_471iby   A     HEZHEXANE-1,6-DIOL E - 60
1iby_A_471iby   A     CUCOPPER (II) ION G - 61
1j83_A_11881j83   A     MSESELENOMETHIONINE L - 1188
1j83_A_11881j83   A     CACALCIUM ION L - 1188
1j83_A_11881j83   A     MSESELENOMETHIONINE L - 1199
1lur_A_12561lur   A     MSESELENOMETHIONINE V - 1266
1lur_A_12561lur   A     MSESELENOMETHIONINE I - 1267
1lur_A_12561lur   A     MSESELENOMETHIONINE L - 1269
1nsz_A_2651nsz   A     GLCGLUCOSE V - 277
1nsz_A_2651nsz   A     GLCGLUCOSE F - 279
1nzi_A_821nzi   A     MGMAGNESIUM ION S - 97
1vk3_A_3071vk3   A     MSESELENOMETHIONINE Y - 320
1vk3_A_3071vk3   A     MSESELENOMETHIONINE R - 321

Clusters included in this Subclass
CLUSTER: AR.2.93
CLUSTER: AR.3.74
CLUSTER: AR.4.35