Information on SUBCLASS 5.1.2 |
Subclass Accession number: 3988
Subclass: 5.1.2 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 12.5 +/- 13.9 Average RMSD (Å) : 0.767 +/- 0.264 Consensus geometry
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Consensus Sequence: | XpXXXppXX |
(φψ)-conformation: | bbapabpbb |
Pattern: | [aglvw] | [agktv] | [AFILV] | x | [hkns] | x | [dgknqst] | [adens] | [eqsty] | [depqrst] | x | x | [afivy] |
Conservation: | -1.042 | -0.788 | 1.593 | -1.248 | 2.293 | -0.491 | -0.269 | 0.489 | 0.024 | 0.039 | -0.577 | -0.176 | 0.153 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f1s_A_932 | 1f1s | A | 933 | 945 | WAVIKHDNQESLI | EEEEE-S-S-EEE | bbbbxabaxxbbx |
1j0m_A_681 | 1j0m | A | 682 | 694 | VGANFWTDTTQTA | EEEEE-SSS-EEE | bbbbxababxbbb |
1ji1_A_578 | 1ji1 | A | 580 | 592 | AVVLNNDSVSHTV | EEEEE-SSS-EEE | bxbbbaxabxbxb |
1jov_A_133 | 1jov | A | 135 | 147 | LTFTHYGEESAQA | EEEEE--SS-EEE | bbbbxaxabpbxb |
1m53_A_543 | 1m53 | A | 546 | 558 | LVVVNFKEYPVRY | EEEEE-SSS-EEE | bbbbxaxabwbbb |
1n7o_A_834 | 1n7o | A | 835 | 847 | WGIVKYDDSVSTI | EEEEESS-S-EEE | bbbbbabaxxbxb |
1ok0_A_20 | 1ok0 | A | 21 | 33 | SQADNGCAETVTV | EEEEE-SSS-EEE | bbbbxaxabpbbb |
1pm4_A_96 | 1pm4 | A | 98 | 110 | WKIKNNSSETSNY | EEEEE-SSS-EEE | xbbbxaxaxxbxb |
1rwr_A_45 | 1rwr | A | 45 | 57 | GVVFNNGLTDGVS | EEEEEE-SS-EEE | ebbxxababxbbx |
1uas_A_299 | 1uas | A | 301 | 313 | VVLWNRQSYQATI | EEEEE-SSS-EEE | bbbbxaxabpbxb |
1uok_*_502 | 1uok | - | 505 | 517 | LVIANFTAEECIF | EEEEE-SSS-EEE | bbbbxababxbbb |
1vh4_A_182 | 1vh4 | A | 187 | 199 | EHFVSLNDARHFT | EEEEESSSS-EEE | bbbbbabaxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1uas_A_299 | 1uas | A | GOLGLYCEROL | R - 306 |
1uas_A_299 | 1uas | A | GOLGLYCEROL | Q - 307 |
1uas_A_299 | 1uas | A | GOLGLYCEROL | S - 308 |
Clusters included in this Subclass |
CLUSTER: AR.5.29 |
CLUSTER: AR.6.80 |