Information on SUBCLASS 5.15.1 |
Subclass Accession number: 4014
Subclass: 5.15.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 15.4 +/- 18.0 Average RMSD (Å) : 0.600 +/- 0.249 Consensus geometry
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Consensus Sequence: | XXhpXcpXh |
(φψ)-conformation: | bbpbplpbb |
Pattern: | x | x | x | [LMPVW] | [ekpqrs] | [dkpq] | [DGN] | x | x | [afilmv] | x |
Conservation: | -1.000 | -0.920 | -0.615 | 0.443 | 0.387 | 0.040 | 2.283 | 0.215 | -1.289 | 0.151 | -0.695 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ci9_A_239 | 1ci9 | A | 239 | 248 | .VRMRDGIEVP | .EE--TTEEEE | .bxxbxvxbbp |
1ds1_A_260 | 1ds1 | A | 261 | 271 | AVYLEPGDLLI | EE---TT-EEE | bbxxbpvxbxb |
1g6g_A_114 | 1g6g | A | 114 | 123 | .QKVEKNSNQL | .EE--TT--EE | .bxxxxvbxbx |
1g6g_A_122 | 1g6g | A | 122 | 131 | .QLLSQGDEIT | .EE--TT-EEE | .bxxbpvxbbb |
1jj2_E_27 | 1jj2 | E | 31 | 41 | RRLWYPDIDVS | EE---TT-EEE | bbbbbplbbbb |
1kqr_A_72 | 1kqr | A | 73 | 83 | TFNPPVDYWML | EE---TTEEEE | bbbxxxvbxxb |
1nx4_A_231 | 1nx4 | A | 233 | 242 | KHFWEDGDLL. | EE---TT-EE. | bbxxbpvxbb. |
1oih_A_244 | 1oih | A | 246 | 256 | RWRWEAGDVAI | EE---TT-EEE | bbbxbpvxbbb |
1otj_A_235 | 1otj | A | 237 | 247 | RWRWQPNDIAI | EE---TT-EEE | bbxxbpvxbbb |
1tki_A_169 | 1tki | A | 169 | 178 | .RQLKPGDNFR | .EE--TT-EEE | .bxxxpvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ds1_A_260 | 1ds1 | A | AKG2-OXYGLUTARIC ACID | L - 264 |
1kqr_A_72 | 1kqr | A | GOLGLYCEROL | W - 81 |
1nx4_A_231 | 1nx4 | A | MSESELENOMETHIONINE | Y - 231 |
1nx4_A_231 | 1nx4 | A | MSESELENOMETHIONINE | Y - 232 |
1nx4_A_231 | 1nx4 | A | 2OG2-OXO-GLUTARIC ACID | W - 236 |
1nx4_A_231 | 1nx4 | A | MSESELENOMETHIONINE | L - 242 |
Clusters included in this Subclass |
CLUSTER: AR.5.57 |
CLUSTER: AR.7.53 |