Information on SUBCLASS 5.27.1 |
Subclass Accession number: 4031
Subclass: 5.27.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 9.7 +/- 11.8 Average RMSD (Å) : 0.967 +/- 0.186 Consensus geometry
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Consensus Sequence: | phphXXhhX |
(φψ)-conformation: | bbpaaapbb |
Pattern: | x | x | [dery] | [CFGV] | [KNRST] | [AGP] | [adk] | [dnstw] | [aflv] | [IMTV] | x |
Conservation: | -0.271 | -0.878 | -0.222 | -0.405 | 1.157 | 1.358 | -0.645 | -0.467 | -0.542 | 1.943 | -1.028 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b9m_A_246 | 1b9m | A | 248 | 258 | TAYFNADSVII | EEEE-GGG-EE | bxbbxaaaxbx |
1j48_A_40 | 1j48 | A | 40 | 50 | QDACNPATATS | EEEE-TTT-EE | bxbbxaaaxbb |
1mdb_A_423 | 1mdb | A | 424 | 434 | VVEGRAKDQIN | EEEEEGGG-EE | bxaexaaaxbb |
1o89_A_101 | 1o89 | A | 101 | 111 | QARVKGDWLVA | EEEE-GGG-EE | bbbbxaaaxbp |
1rwr_A_215 | 1rwr | A | 216 | 226 | AIDGTAAGAMY | EEEE-TT--EE | abbbxaaaxbb |
1s0y_A_40 | 1s0y | A | 43 | 53 | IREGSGINFVE | EEEE-GGG-EE | bbbbxaaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b9m_A_246 | 1b9m | A | MSESELENOMETHIONINE | V - 247 |
1b9m_A_246 | 1b9m | A | MSESELENOMETHIONINE | T - 248 |
1b9m_A_246 | 1b9m | A | MSESELENOMETHIONINE | A - 249 |
1mdb_A_423 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | V - 425 |
1mdb_A_423 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | G - 427 |
1mdb_A_423 | 1mdb | A | AMPADENOSINE MONOPHOSPHATE | R - 428 |
1s0y_A_40 | 1s0y | A | MLAMALONIC ACID | F - 40 |
1s0y_A_40 | 1s0y | A | MLAMALONIC ACID | F - 51 |
1s0y_A_40 | 1s0y | A | MLAMALONIC ACID | E - 53 |
Clusters included in this Subclass |
CLUSTER: AR.4.168 |
CLUSTER: AR.5.113 |
CLUSTER: AR.6.88 |