Information on SUBCLASS 5.28.1 |
Subclass Accession number: 6832
Subclass: 5.28.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.1 +/- 12.5 Average RMSD (Å) : 0.867 +/- 0.153 Consensus geometry
|
Consensus Sequence: | XpXpXhXXh |
(φψ)-conformation: | bbaaapppb |
Pattern: | [AGL] | x | x | [NS] | x | [DST] | [EMQ] | [AV] | [PT] | x | [CIL] |
Conservation: | -1.045 | -0.163 | -1.155 | 1.372 | -1.045 | 0.168 | 0.168 | 0.677 | 1.679 | -1.045 | 0.388 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1m3k_A_111 | 1m3k | A | 115 | 125 | GMESMSMAPHC | EEEESTT--EE | bbbbaaapxxb |
1moo_A_47 | 1moo | A | 47 | 57 | LSVSYDQATSL | EEEE-TT--EE | xbbbaaapbxa |
1pfq_A_222 | 1pfq | A | 226 | 236 | AQFNDTEVPLI | EEEE-TT--EE | bbbbaaaxxxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m3k_A_111 | 1m3k | A | GOLGLYCEROL | M - 119 |
1moo_A_47 | 1moo | A | 4MZ4-METHYLIMIDAZOLE | L - 57 |
1pfq_A_222 | 1pfq | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 227 |
1pfq_A_222 | 1pfq | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 229 |
1pfq_A_222 | 1pfq | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 230 |
1pfq_A_222 | 1pfq | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 231 |
1pfq_A_222 | 1pfq | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 232 |
Clusters included in this Subclass |
CLUSTER: AR.4.112 |