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Information on SUBCLASS 5.28.1
Subclass Accession number: 6832
Subclass: 5.28.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 9.1 +/- 12.5
Average RMSD (Å) : 0.867 +/- 0.153

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XpXpXhXXh
(φψ)-conformation: bbaaapppb
Pattern: [AGL]xx[NS]x[DST][EMQ][AV][PT]x[CIL]
Conservation:-1.045-0.163-1.1551.372-1.0450.1680.1680.6771.679-1.0450.388
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1m3k_A_1111m3k   A115125GMESMSMAPHCEEEESTT--EEbbbbaaapxxb
1moo_A_471moo   A4757LSVSYDQATSLEEEE-TT--EExbbbaaapbxa
1pfq_A_2221pfq   A226236AQFNDTEVPLIEEEE-TT--EEbbbbaaaxxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m3k_A_1111m3k   A     GOLGLYCEROL M - 119
1moo_A_471moo   A     4MZ4-METHYLIMIDAZOLE L - 57
1pfq_A_2221pfq   A     NAGN-ACETYL-D-GLUCOSAMINE Q - 227
1pfq_A_2221pfq   A     NAGN-ACETYL-D-GLUCOSAMINE N - 229
1pfq_A_2221pfq   A     NAGN-ACETYL-D-GLUCOSAMINE D - 230
1pfq_A_2221pfq   A     NAGN-ACETYL-D-GLUCOSAMINE T - 231
1pfq_A_2221pfq   A     NAGN-ACETYL-D-GLUCOSAMINE E - 232

Clusters included in this Subclass
CLUSTER: AR.4.112