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Information on SUBCLASS 6.41.1
Subclass Accession number: 4131
Subclass: 6.41.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0016798 (>50 %)  
SCOP : 49898 (>50 %)  49899 (>50 %)  49925 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 16.7 +/- 20.0
Average RMSD (Å) : 0.700 +/- 0.265

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXhhcXXhhX
(φψ)-conformation: bbpppbappb
Pattern: [AIL][KNR][AY][KV][AIV][LM][DN][GQS][NTV][IL][AG][CNS]x[FV]
Conservation:-0.6340.289-0.347-0.377-0.1721.5691.895-0.749-0.9801.1620.481-0.518-1.6720.053
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1o4y_A_1201o4y   A124137IKAKIMDQVLANAFEEEE--SSSSEEEEbbbbxxxbaxxbbb
1o4z_A_1571o4z   A161174ARAKVMNSTLASDVEEEE--SSSSEEEEbxbbpxxbaxxbbb
2scu_B_2502scu   B250263LNYVALDGNIGCMVEEEEE-S-SEEEEEbbxbxbbbabxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o4z_A_1571o4z   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID A - 171
1o4z_A_1571o4z   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID D - 173
1o4z_A_1571o4z   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID W - 175
2scu_B_2502scu   B     NEPN1-PHOSPHONOHISTIDINE N - 251

Clusters included in this Subclass
CLUSTER: AR.5.291