Information on SUBCLASS 6.41.1 |
Subclass Accession number: 4131
Subclass: 6.41.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016798 (>50 %) SCOP : 49898 (>50 %) 49899 (>50 %) 49925 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 20.0 Average RMSD (Å) : 0.700 +/- 0.265 Consensus geometry
|
Consensus Sequence: | hXhhcXXhhX |
(φψ)-conformation: | bbpppbappb |
Pattern: | [AIL] | [KNR] | [AY] | [KV] | [AIV] | [LM] | [DN] | [GQS] | [NTV] | [IL] | [AG] | [CNS] | x | [FV] |
Conservation: | -0.634 | 0.289 | -0.347 | -0.377 | -0.172 | 1.569 | 1.895 | -0.749 | -0.980 | 1.162 | 0.481 | -0.518 | -1.672 | 0.053 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1o4y_A_120 | 1o4y | A | 124 | 137 | IKAKIMDQVLANAF | EEEE--SSSSEEEE | bbbbxxxbaxxbbb |
1o4z_A_157 | 1o4z | A | 161 | 174 | ARAKVMNSTLASDV | EEEE--SSSSEEEE | bxbbpxxbaxxbbb |
2scu_B_250 | 2scu | B | 250 | 263 | LNYVALDGNIGCMV | EEEEE-S-SEEEEE | bbxbxbbbabxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o4z_A_157 | 1o4z | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | A - 171 |
1o4z_A_157 | 1o4z | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | D - 173 |
1o4z_A_157 | 1o4z | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 175 |
2scu_B_250 | 2scu | B | NEPN1-PHOSPHONOHISTIDINE | N - 251 |
Clusters included in this Subclass |
CLUSTER: AR.5.291 |