Information on SUBCLASS 8.12.1 |
Subclass Accession number: 6889
Subclass: 8.12.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 11.7 Average RMSD (Å) : 0.633 +/- 0.252 Consensus geometry
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Consensus Sequence: | XXXpXhXXcXXh |
(φψ)-conformation: | bpabpbpplppp |
Pattern: | x | [ATV] | [LT] | [KR] | [ADN] | [IV] | [EGS] | [AER] | [DN] | [ADE] | x | [AIL] |
Conservation: | -0.983 | -0.314 | 0.059 | 1.573 | -0.601 | 1.493 | -0.505 | -0.601 | 1.681 | -0.314 | -1.078 | -0.410 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hv9_A_426 | 1hv9 | A | 426 | 437 | TVTRNVGENALA | EE-S-B-TT-EE | bxabpbxxvbbx |
1n6a_A_317 | 1n6a | A | 320 | 331 | RTLRAVEADEEL | EESS-B-TT-EE | bxabxbxxvxxx |
1p0y_A_81 | 1p0y | A | 85 | 96 | VALKDISRNDVI | EESS---TT-EE | xpabpbbpvxpa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hv9_A_426 | 1hv9 | A | COCOBALT (II) ION | L - 436 |
1hv9_A_426 | 1hv9 | A | COACOENZYME A | L - 436 |
1hv9_A_426 | 1hv9 | A | COCOBALT (II) ION | A - 437 |
1hv9_A_426 | 1hv9 | A | COACOENZYME A | A - 437 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | K - 317 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | C - 318 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | I - 319 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | R - 320 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | T - 321 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | V - 325 |
1n6a_A_317 | 1n6a | A | MSESELENOMETHIONINE | L - 331 |
1p0y_A_81 | 1p0y | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 81 |
1p0y_A_81 | 1p0y | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 82 |
1p0y_A_81 | 1p0y | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | G - 83 |
Clusters included in this Subclass |
CLUSTER: AR.7.36 |