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Information on SUBCLASS 0.1.2
Subclass Accession number: 2552
Subclass: 0.1.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 44

Average sequence ID (%) : 39.2 +/- 27.6
Average RMSD (Å) : 0.311 +/- 0.181

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XphX
(φψ)-conformation: bbaa
Pattern: [anstv][hknqrsw][cilv][acgpst]x[fhilvy]x[adegknst][frw][ILMVY][dehknqrsty]
Conservation:-0.050-0.1190.356-0.962-0.9900.262-0.719-0.3592.5160.704-0.639
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0j_A_2261a0j   A229239TKVCNYRSWISEEGGGGHHHHHxxaaaaaaaaa
1a7s_*_2011a7s   -204214TRVALFRDWIDEEGGGGHHHHHxxaaaaaaaaa
1azz_A_2261azz   A229239TRVTYFLDWIQEESGGGHHHHHxxaaaaaaaaa
1bio_*_2261bio   -229239TRVASYAAWIDEEGGGGHHHHHxxaaaaaaaaa
1bqy_A_2261bqy   A229239TKVFDYLDWIKEEGGGGHHHHHxxaaaaaaaaa
1bru_P_2261bru   P229239TRVSNYIDWINEEGGGSHHHHHxxaaaaaaaaa
1cgh_A_2261cgh   A229239TRVSSFLPWIREEGGGGHHHHHxxaaaaaaaaa
1ddj_A_7721ddj   A775785VRVSRFVTWIEEEGGGSHHHHHxxaaaaaaaaa
1dle_A_2251dle   A229239INLFQVLPWLKEEGGGGHHHHHxxaaaaaaaaa
1eax_A_2261eax   A229239TRLPLFRDWIKEESGGGHHHHHxxaaaaaaaaa
1ekb_B_2261ekb   B229239ARVPRFTEWIQEEGGGTHHHHHxxaaaaaaaaa
1elt_*_2261elt   -229239TRVSAYISWMNEEGGGGHHHHHxxaaaaaaaaa
1elv_A_6471elv   A651661TRVKNYVDWIMEEGGGGHHHHHxxaaaaaaaaa
1eq9_A_2261eq9   A229239TRVSSFVSWINEEGGGGHHHHHxxaaaaaaaaa
1euf_A_2261euf   A229239TRISSFLSWIHEEGGGTHHHHHxxaaaaaaaaa
1f7z_A_2261f7z   A229239TKVCNYVDWIQEEGGGSHHHHHxxaaaaaaaaa
1fi8_A_2261fi8   A229239TKVSTFLSWIKEEGGGGHHHHHpxaaaaaaaaa
1fjs_A_2261fjs   A229239TKVTAFLKWIDEEGGGGHHHHHxxaaaaaaaaa
1fon_A_2211fon   A224234TRVSAFIDWIDEEGGGSHHHHHxxaaaaaaaaa
1fuj_A_2261fuj   A229239TRVALYVDWIREEGGGGHHHHHxxaaaaaaaaa
1fxy_A_2261fxy   A229239TKVYNYVKWIKEEGGGGHHHHHxxaaaaaaaaa
1gdn_A_2261gdn   A229239ASVGALRSFIDEETTTTHHHHHxxaaaaaaaaa
1gg6_C_2251gg6   C229239ARVTALVNWVQEEGGGTHHHHHxxaaaaaaaaa
1gj7_B_2261gj7   B229239TRVSHFLPWIREEGGGSHHHHHxxaaaaaaaaa
1gvk_B_2261gvk   B229239TRVSAYISWINEEGGGSHHHHHxxaaaaaaaaa
1gvz_A_2281gvz   A229239TKVMPHKKWIKEESGGGHHHHHxxaaaaaaaaa
1gwu_A_1741gwu   A175185NQCRFIMDRLYEEGGGGHHHHHbxaaaaaaaaa
1h8d_H_2261h8d   H229239THVFRLKKWIQEETGGGHHHHHxxaaaaaaaaa
1hj8_A_2261hj8   A229239AKVCIFNDWLTEEGGGGHHHHHxxaaaaaaaaa
1hj9_A_2261hj9   A229239TKVCNYVSWIKEEGGGGHHHHHxxaaaaaaaaa
1iau_A_2261iau   A229239TKVSSFVHWIKEEGGGGHHHHHxxaaaaaaaaa
1kli_H_2261kli   H229239TRVSQYIEWLQEEGGGGHHHHHxxaaaaaaaaa
1lo6_A_2261lo6   A229239TNVCRYTNWIQEEGGGGHHHHHxxaaaaaaaaa
1lto_A_2261lto   A229239TRVTYYLDWIHEEGGGGHHHHHxxaaaaaaaaa
1m9u_A_2261m9u   A229239TRVSAYLGWIGEEGGGTHHHHHxxaaaaaaaaa
1nzj_A_761nzj   A7686LWQSQRHDAYREEGGG-HHHHHxbaaaaaaaaa
1p57_B_2261p57   B229239TKVSDFREWIFEEGGGGHHHHHxxaaaaaaaaa
1ppf_E_2261ppf   E229239APVAQFVNWIDEEGGGGHHHHHxxaaaaaaaaa
1pyt_C_6261pyt   C629639TRVSAFIDWINEETTTTHHHHHxxaaaaaaaaa
1rtf_B_2261rtf   B229239TKVTNYLDWIREEGGGGHHHHHxxaaaaaaaaa
1s83_A_2261s83   A229239TKVCNYVNWIQEEGGG-HHHHHxxaaaaaaaaa
1ton_*_2261ton   -229239AKLIKFTSWIKEEGGGGHHHHHxxaaaaaaaaa
2hlc_A_2262hlc   A229239SRVTSYMDWIQEEGGGGHHHHHxxaaaaaaaaa
2pka_B_2262pka   B229239TKLIFYLDWIDEEGGGGHHHHHxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a0j_A_2261a0j   A     BENBENZAMIDINE G - 226
1a0j_A_2261a0j   A     BENBENZAMIDINE V - 227
1a0j_A_2261a0j   A     BENBENZAMIDINE Y - 228
1a7s_*_2011a7s   *     EOHETHANOL D - 201
1a7s_*_2011a7s   *     EOHETHANOL F - 202
1a7s_*_2011a7s   *     EOHETHANOL R - 205
1a7s_*_2011a7s   *     EOHETHANOL L - 208
1a7s_*_2011a7s   *     NAGN-ACETYL-D-GLUCOSAMINE D - 211
1bio_*_2261bio   *     GOLGLYCEROL R - 230
1bqy_A_2261bqy   A     ARMDEOXY-METHYL-ARGININE G - 226
1bqy_A_2261bqy   A     ARMDEOXY-METHYL-ARGININE V - 227
1bqy_A_2261bqy   A     ARMDEOXY-METHYL-ARGININE Y - 228
1bru_P_2261bru   P     1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL S - 226
1cgh_A_2261cgh   A     PPHPHENYLALANINE PHOSPHINIC ACID E - 226
1cgh_A_2261cgh   A     PPHPHENYLALANINE PHOSPHINIC ACID V - 227
1ekb_B_2261ekb   B     ZNZINC ION E - 236
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID K - 654
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID N - 655
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID Y - 656
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID V - 657
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID D - 658
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID W - 659
1elv_A_6471elv   A     NES2-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-ETHANESULFONIC ACID I - 660
1eq9_A_2261eq9   A     PMSBENZYLSULFINIC ACID D - 226
1eq9_A_2261eq9   A     PMSBENZYLSULFINIC ACID V - 227
1euf_A_2261euf   A     PO4PHOSPHATE ION L - 235
1euf_A_2261euf   A     PO4PHOSPHATE ION H - 239
1fjs_A_2261fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE G - 226
1fjs_A_2261fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE I - 227
1fjs_A_2261fjs   A     Z34N-[2-[5-[AMINO(IMINO)METHYL]-2-HYDROXYPHENOXY]-3,5-DIFLUORO-6-[3-(4,5-DIHYDRO-1-METHYL-1H-IMIDAZOL-2-YL) PHENOXY]PYRIDIN-4-YL]-N-METHYLGLYCINE Y - 228
1fjs_A_2261fjs   A     GOLGLYCEROL K - 230
1fjs_A_2261fjs   A     GOLGLYCEROL T - 232
1fjs_A_2261fjs   A     GOLGLYCEROL L - 235
1fjs_A_2261fjs   A     GOLGLYCEROL K - 236
1fjs_A_2261fjs   A     GOLGLYCEROL W - 237
1fjs_A_2261fjs   A     GOLGLYCEROL D - 239
1fjs_A_2261fjs   A     GOLGLYCEROL S - 241
1gdn_A_2261gdn   A     GOLGLYCEROL S - 230
1gdn_A_2261gdn   A     GOLGLYCEROL G - 232
1gdn_A_2261gdn   A     GOLGLYCEROL A - 233
1gg6_C_2251gg6   C     APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE) G - 226
1gg6_C_2251gg6   C     APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE) V - 227
1gg6_C_2251gg6   C     APF1,1,1-TRIFLUORO-3-ACETAMIDO-4-PHENYL BUTAN-2-ONE(N-ACETYL-L-PHENYLALANYL TRIFLUOROMETHYL KETONE) Y - 228
1gg6_C_2251gg6   C     EDO1,2-ETHANEDIOL V - 238
1gg6_C_2251gg6   C     EDO1,2-ETHANEDIOL Q - 239
1gg6_C_2251gg6   C     EDO1,2-ETHANEDIOL L - 242
1gj7_B_2261gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE G - 226
1gj7_B_2261gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 227
1gj7_B_2261gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE Y - 228
1gvz_A_2281gvz   A     GOLGLYCEROL P - 233
1gvz_A_2281gvz   A     GOLGLYCEROL H - 234
1gvz_A_2281gvz   A     GOLGLYCEROL K - 235
1gvz_A_2281gvz   A     GOLGLYCEROL I - 238
1gvz_A_2281gvz   A     ACTACETATE ION I - 238
1gvz_A_2281gvz   A     ACTACETATE ION K - 239
1gvz_A_2281gvz   A     ACTACETATE ION I - 242
1gvz_A_2281gvz   A     ACTACETATE ION E - 243
1gwu_A_1741gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 174
1gwu_A_1741gwu   A     CACALCIUM ION K - 174
1gwu_A_1741gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 175
1gwu_A_1741gwu   A     CACALCIUM ION N - 175
1gwu_A_1741gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 176
1gwu_A_1741gwu   A     CACALCIUM ION Q - 176
1gwu_A_1741gwu   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 179
1gwu_A_1741gwu   A     CACALCIUM ION F - 179
1hj8_A_2261hj8   A     BAMBENZAMIDINE G - 226
1hj8_A_2261hj8   A     BAMBENZAMIDINE V - 227
1hj8_A_2261hj8   A     BAMBENZAMIDINE Y - 228
1hj9_A_2261hj9   A     ANLANILINE G - 226
1hj9_A_2261hj9   A     ANLANILINE V - 227
1hj9_A_2261hj9   A     ANLANILINE Y - 228
1iau_A_2261iau   A     ASAASPARTIC ALDEHYDE R - 226
1p57_B_2261p57   B     CR42-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL} BENZENOLATE G - 226
1p57_B_2261p57   B     CR42-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL} BENZENOLATE V - 227
1p57_B_2261p57   B     CR42-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL} BENZENOLATE Y - 228
1s83_A_2261s83   A     4HA4-HYDROXYBUTAN-1-AMINIUM G - 226
1s83_A_2261s83   A     4HA4-HYDROXYBUTAN-1-AMINIUM V - 227
1s83_A_2261s83   A     4HA4-HYDROXYBUTAN-1-AMINIUM Y - 228
2pka_B_2262pka   B     BENBENZAMIDINE S - 226
2pka_B_2262pka   B     BENBENZAMIDINE I - 227
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvk_B_2261gvk   B SOBSO4 BINDING SITE FOR CHAIN BR - 230
1gvk_B_2261gvk   B SOBSO4 BINDING SITE FOR CHAIN BS - 232
1gvk_B_2261gvk   B SOBSO4 BINDING SITE FOR CHAIN BA - 233
1gvz_A_2281gvz   A AC1GOL BINDING SITE FOR CHAIN AH - 234
1gvz_A_2281gvz   A AC1GOL BINDING SITE FOR CHAIN AW - 237
1gvz_A_2281gvz   A AC4ACT BINDING SITE FOR CHAIN AK - 239

Clusters included in this Subclass
CLUSTER: EH.3.6
CLUSTER: EH.4.2