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Information on SUBCLASS 0.1.78
Subclass Accession number: 2628
Subclass: 0.1.78 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 31.2 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: VEME
(φψ)-conformation: bbaa
Pattern: [GV][V][E][M][E][AL][A][GT][IL][MY][GV][IV][AG][AT][EL][RY]
Conservation:-1.2200.8171.4961.4961.496-0.8810.817-0.7110.138-0.202-1.2200.477-0.202-0.371-1.390-0.541
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1q1g_A_1801q1g   A180195VVEMELATLMVIGTLREEESSHHHHHHHHHHHbbbaaaaaaaaaaaaa
1vhw_A_1781vhw   A178193GVEMEAAGIYGVAAEYEEESSHHHHHHHHHHHbbbaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1q1g_A_1801q1g   A     MTI3,4-DIHYDROXY-2-[(METHYLSULFANYL)METHYL]-5-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)PYRROLIDINIUM V - 181
1q1g_A_1801q1g   A     MTI3,4-DIHYDROXY-2-[(METHYLSULFANYL)METHYL]-5-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)PYRROLIDINIUM E - 182
1q1g_A_1801q1g   A     MTI3,4-DIHYDROXY-2-[(METHYLSULFANYL)METHYL]-5-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)PYRROLIDINIUM M - 183
1q1g_A_1801q1g   A     MTI3,4-DIHYDROXY-2-[(METHYLSULFANYL)METHYL]-5-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)PYRROLIDINIUM E - 184
1vhw_A_1781vhw   A     ADNADENOSINE V - 179
1vhw_A_1781vhw   A     ADNADENOSINE E - 180
1vhw_A_1781vhw   A     ADNADENOSINE M - 181
1vhw_A_1781vhw   A     ADNADENOSINE E - 182

Clusters included in this Subclass
CLUSTER: EH.2.249