Logo
Information on SUBCLASS 1.1.14
Subclass Accession number: 950
Subclass: 1.1.14 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 9.3 +/- 13.4
Average RMSD (Å) : 0.439 +/- 0.150

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XhXXp
(φψ)-conformation: bbpaa
Pattern: xx[afilmptv]xx[adekqrst][adegnqrst]x
Conservation:-0.892-0.3571.370-0.153-1.2951.5580.032-0.263
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a3c_*_1611a3c   -163170MVQLDEVDEEE-HHHHbxbbaaaa
1aui_B_361aui   B3642.SLSVEEF.EE-HHHH.bxbaaaa
1byf_A_31byf   A1017ETMNYADAEEE-HHHHxbbxaaaa
1fp2_A_921fp2   A94101YALTVASEEEE-HHHHbbxbaaaa
1gdn_A_1561gdn   A161168PIVSRATCEEE-HHHHxxbpaaaa
1gj7_B_1561gj7   B161168KLISHRECEEE-HHHHbxbxaaaa
1gz2_A_151gz2   A2229RELSWSRAEEE-HHHHxxbxaaaa
1h7e_A_1221h7e   A127134HAISAAEAEEE-HHHHbxbxaaaa
1h8u_A_41h8u   A916SLQTFSQAEEE-HHHHxxbxaaaa
1htr_B_2671htr   B269276FPLPPSSYEEE-HHHHbxbxaaaa
1iq8_A_4891iq8   A489496LTLGIEGAEEE-HHHHxxxbaaaa
1jdr_A_1791jdr   A179185.KTHLKNS.EE-HHHH.bxbaaaa
1jkg_B_5271jkg   B537544RNASSEEIEE--HHHHbxxxaaaa
1k8k_D_2201k8k   D225232FVLFPRHTEEE-HHHHbbbbaaaa
1kzl_A_1571kzl   A159166IMMISYTQEEE-HHHHbbxxaaaa
1m2o_A_6611m2o   A664671IYHGEQIAEEE-HHHHbbbxaaaa
1npy_A_761npy   A7682.EIHPSAQ.EE-HHHH.bxxaaaa
1o4y_A_2221o4y   A225232RTVTRAEIEEE-HHHHbbbbaaaa
1oi2_A_3381oi2   A345352LKVDDETLEEE-HHHHbxbbaaaa
1oqv_A_1031oqv   A113120DGLTQAQCEEE-HHHHxvxxaaaa
1p57_B_1561p57   B161168PIISNDVCEEE-HHHHxxbxaaaa
1qdm_A_2731qdm   A275282FALKPEEYEEE-HHHHxxbxaaaa
1qhl_A_181qhl   A2128RTFDLDELEEE-HHHHbbbxaaaa
1sdo_A_1561sdo   A160167ILPMKELSEEE-HHHHbbxxaaaa
1ur1_A_361ur1   A3946AALNATIAEEE-HHHHbxbxaaaa
1vhv_A_541vhv   A5461VELERSDLEEE-HHHHxxbbaaaa
1viu_A_591viu   A6471RQFRVATWEEE-HHHHbbxbaaaa
2hlc_A_1562hlc   A161168LVIDNDRCEEE-HHHHxxbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a3c_*_1611a3c   *     SMSAMARIUM (III) ION D - 167
1aui_B_361aui   B     CACALCIUM ION S - 36
1aui_B_361aui   B     CACALCIUM ION L - 37
1aui_B_361aui   B     CACALCIUM ION S - 38
1aui_B_361aui   B     CACALCIUM ION E - 41
1byf_A_31byf   A     ZNZINC ION Y - 3
1byf_A_31byf   A     ZNOZINC ION, 2 WATERS COORDINATED Y - 3
1byf_A_31byf   A     ZNZINC ION D - 9
1byf_A_31byf   A     ZNOZINC ION, 2 WATERS COORDINATED D - 9
1byf_A_31byf   A     ZNZINC ION E - 10
1byf_A_31byf   A     ZN3ZINC ION, 1 WATER COORDINATED E - 10
1gdn_A_1561gdn   A     GOLGLYCEROL K - 157
1gdn_A_1561gdn   A     GOLGLYCEROL I - 162
1gdn_A_1561gdn   A     GOLGLYCEROL V - 163
1gdn_A_1561gdn   A     GOLGLYCEROL S - 164
1gdn_A_1561gdn   A     GOLGLYCEROL R - 165
1gdn_A_1561gdn   A     GOLGLYCEROL A - 166
1gj7_B_1561gj7   B     1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE V - 160
1h8u_A_41h8u   A     GOLGLYCEROL T - 12
1h8u_A_41h8u   A     GOLGLYCEROL S - 14
1h8u_A_41h8u   A     GOLGLYCEROL Q - 15
1h8u_A_41h8u   A     GOLGLYCEROL F - 18
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 179
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 180
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 181
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 182
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 183
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 184
1jdr_A_1791jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 185
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID I - 159
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID M - 160
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID M - 161
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID I - 162
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID S - 163
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID Y - 164
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID T - 165
1kzl_A_1571kzl   A     CRM3-[8-((2S,3S,4R)-2,3,4,5-TETRAHYDROXYPENTYL)-2,4,7-TRIOXO-1,3,8-TRIHYDROPTERIDIN-6-YL]PROPANOIC ACID Q - 166
1oqv_A_1031oqv   A     GOLGLYCEROL K - 106
1ur1_A_361ur1   A     AHRALPHA-L-ARABINOFURANOSE N - 42
1viu_A_591viu   A     MSESELENOMETHIONINE T - 59
1viu_A_591viu   A     MSESELENOMETHIONINE V - 60
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1a3c_*_1611a3c   * SM1SM3+ ION BINDING SITE. THE SM3+ ION LIES ON A CRYSTALLOGRAPHIC TWO-FOLD AXIS, AND ISOCTAHEDRALLY COORDINATED BY THE OXYGENS OF THREE AMINO ACID SIDE CHAINS AND THEIR SYMMETRY RELATED ATOMS.D - 167
1aui_B_361aui   B CA1CALCIUM BINDING SITE.S - 36
1aui_B_361aui   B CA1CALCIUM BINDING SITE.E - 41
1ur1_A_361ur1   A AC4CL BINDING SITE FOR CHAIN AA - 43

Clusters included in this Subclass
CLUSTER: EH.0.14
CLUSTER: EH.1.26
CLUSTER: EH.2.25