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Information on SUBCLASS 1.1.15
Subclass Accession number: 2644
Subclass: 1.1.15 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 27

Average sequence ID (%) : 9.5 +/- 13.0
Average RMSD (Å) : 0.644 +/- 0.199

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XhpXX
(φψ)-conformation: bbpaa
Pattern: xxx[dhknpqst][adenpqs]xxxx
Conservation:-0.431-1.4260.2782.0610.689-0.302-0.2140.234-0.890
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1amw_*_41amw   -614FEFQAEITQEE--HHHHHbxxxaaaaa
1aq0_A_491aq0   A5260VGAPNDVLSEEE-GGGHHbbbwaaaaa
1c0p_A_11281c0p   A11351143LSVHAPKYCEE--HHHHHbbbxaaaaa
1cjm_A_1241cjm   A128136VARNPKDVAEE--HHHHHbbbpaaaaa
1e29_A_181e29   A1927TTLTARQFTEE--HHHHHbbxxaaaaa
1euv_A_4681euv   A469477VAFNSFFYTEE--THHHHbbxxaaaaa
1gkm_A_241gkm   A2533LQLDASAAPEEE-GGGHHbbxxaaaaa
1gs5_A_1561gs5   A157165MNVNADQAAEE--HHHHHbxbpaaaaa
1hp1_A_1871hp1   A188196EFRKPADEAEE--HHHHHbbxpaaaaa
1hsj_A_4631hsj   A464472VYVTDTQKAEE--SSHHHbbbpaaaaa
1ile_*_1861ile   -186194TPLSSHEVAEE--HHHHHbxbbaaaaa
1j1n_A_3891j1n   A389397FWQDYDYEREE--HHHHHbbxbaaaaa
1j31_A_2301j31   A233241VEIDLNLAREE--HHHHHbxbbaaaaa
1kcf_A_1621kcf   A164172LSLSPKSTYEE--HHHHHbxbxaaaaa
1l1y_A_2471l1y   A250258YTNAPDAEGEE--HHHHHbbbbaaaaa
1n0u_A_5851n0u   A591599EPIDEEVSLEE--HHHHHbxxxaaaaa
1n4k_A_4301n4k   A433441VPVSPAEVREE--HHHHHxxbxaaaaa
1oo0_A_471oo0   A5159AFVHQSVMEEE--HHHHHbbbxaaaaa
1p9b_A_1141p9b   A114122HILFDIHQIEE--HHHHHxxbxaaaaa
1pno_A_2921pno   A293301MAGSAEDAAEE--HHHHHbbxbaaaaa
1q52_A_2171q52   A217225RTYTAEQMHEE-HHHHHHxxbxaaaaa
1q67_A_1521q67   A156164GIVPNSVVNEE--HHHHHxbbxaaaaa
1qla_A_6031qla   A603611YIENPLSVKEE--HHHHHbxxbaaaaa
1uxy_*_3331uxy   -333341GEVSAVETIEE--HHHHHexbxaaaaa
1uzp_A_16041uzp   A16051612EDIDECQE.EE--HHHH.bxxxaaaa.
1v47_A_891v47   A9199YELDLEALAEE--HHHHHbbbxaaaaa
2ebn_*_572ebn   -6068VSNNPNVQHEE--HHHHHxbbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e29_A_181e29   A     HECHEME C I - 32
1e29_A_181e29   A     CACALCIUM ION I - 32
1e29_A_181e29   A     HECHEME C F - 33
1e29_A_181e29   A     CACALCIUM ION F - 33
1e29_A_181e29   A     CACALCIUM ION V - 34
1e29_A_181e29   A     CACALCIUM ION D - 35
1e29_A_181e29   A     HECHEME C T - 36
1e29_A_181e29   A     CACALCIUM ION T - 36
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE N - 158
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE V - 159
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE N - 160
1gs5_A_1561gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 160
1gs5_A_1561gs5   A     MGMAGNESIUM ION N - 160
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE A - 161
1gs5_A_1561gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER A - 161
1gs5_A_1561gs5   A     MGMAGNESIUM ION A - 161
1gs5_A_1561gs5   A     NLGN-ACETYL-L-GLUTAMATE D - 162
1gs5_A_1561gs5   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER D - 162
1gs5_A_1561gs5   A     MGMAGNESIUM ION D - 162
1ile_*_1861ile   *     ZNZINC ION L - 188
1j1n_A_3891j1n   A     MAW4-DEOXY-D-MANNURONIC ACID Q - 391
1j1n_A_3891j1n   A     MAVD-MANNURONIC ACID Q - 391
1j1n_A_3891j1n   A     MAW4-DEOXY-D-MANNURONIC ACID Y - 395
1j1n_A_3891j1n   A     MAVD-MANNURONIC ACID Y - 395
1j1n_A_3891j1n   A     MAW4-DEOXY-D-MANNURONIC ACID E - 396
1j31_A_2301j31   A     MSESELENOMETHIONINE E - 234
1j31_A_2301j31   A     MSESELENOMETHIONINE I - 235
1j31_A_2301j31   A     MSESELENOMETHIONINE D - 236
1j31_A_2301j31   A     MSESELENOMETHIONINE L - 237
1l1y_A_2471l1y   A     BGCBETA-D-GLUCOSE D - 255
1oo0_A_471oo0   A     GOLGLYCEROL R - 48
1oo0_A_471oo0   A     GOLGLYCEROL K - 49
1p9b_A_1141p9b   A     IMO6-O-PHOSPHORYL INOSINE MONOPHOSPHATE D - 124
1uxy_*_3331uxy   *     FADFLAVIN-ADENINE DINUCLEOTIDE E - 334
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION D - 1606
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION I - 1607
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION D - 1608
1uzp_A_16041uzp   A     SMSAMARIUM (III) ION E - 1609
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e29_A_181e29   A AC2CA BINDING SITE FOR CHAIN ZD - 35
1gs5_A_1561gs5   A NLGNLG BINDING SITE FOR CHAIN AA - 161
1uzp_A_16041uzp   A AC2SM BINDING SITE FOR CHAIN AD - 1606
1uzp_A_16041uzp   A AC2SM BINDING SITE FOR CHAIN AI - 1607
1uzp_A_16041uzp   A AC2SM BINDING SITE FOR CHAIN AE - 1609

Clusters included in this Subclass
CLUSTER: EH.1.65
CLUSTER: EH.2.29
CLUSTER: EH.3.22
CLUSTER: EH.5.240