Logo
Information on SUBCLASS 1.1.39
Subclass Accession number: 975
Subclass: 1.1.39 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  2.6 (>75 %)  2.6.1 (>75 %)  
GO : GO:0003676 (>75 %)  GO:0003677 (>75 %)  GO:0005351 (>75 %)  GO:0005386 (>75 %)  GO:0008168 (>75 %)  GO:0008171 (>75 %)  GO:0008483 (>75 %)  GO:0015144 (>75 %)  GO:0015290 (>75 %)  GO:0015291 (>75 %)  GO:0016741 (>75 %)  GO:0016769 (>75 %)  GO:0016829 (>75 %)  GO:0016846 (>75 %)  GO:0016847 (>75 %)  GO:0051119 (>75 %)  
SCOP : 53334 (>75 %)  53335 (>75 %)  53382 (>75 %)  53383 (>75 %)  53384 (>75 %)  53821 (>75 %)  53822 (>75 %)  53823 (>75 %)  64111 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 14.4 +/- 16.1
Average RMSD (Å) : 0.475 +/- 0.126

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 0-45 rho (°): 315-360
Consensus Sequence: hpXhp
(φψ)-conformation: bbpaa
Pattern: [AIV][AKL][ANQ]x[AFLP][DNPR]xx[AG][AKQR][AKT]x[FKV][DE]x
Conservation:0.753-0.5490.0920.677-1.231-0.427-1.108-0.0301.3060.1300.014-0.860-0.6892.535-0.613
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1drk_*_2311drk   -233247IAQLPDQIGAKGVETEE--HHHHHHHHHHHxxbbaaaaaaaaaaa
1gca_*_2531gca   -254268VLNDANNQAKATFDLEE--HHHHHHHHHHHbxbxaaaaaaaaaaa
1iug_A_1361iug   A136150ALADLPALARAFKEKEE--HHHHHHHHHHHxbxxaaaaaaaaaaa
1jye_A_2881jye   A289303IKQDFRLLGQTSVDREE--HHHHHHHHHHHbxbxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1drk_*_2311drk   *     RIPRIBOSE(PYRANOSE FORM) Q - 235
1drk_*_2311drk   *     RIPRIBOSE(PYRANOSE FORM) I - 240
1gca_*_2531gca   *     GALD-GALACTOSE N - 256
1gca_*_2531gca   *     CACALCIUM ION N - 256
1gca_*_2531gca   *     GALD-GALACTOSE Q - 261
1gca_*_2531gca   *     CACALCIUM ION Q - 261
1jye_A_2881jye   A     GOLGLYCEROL Q - 291
1jye_A_2881jye   A     GOLGLYCEROL F - 293

Clusters included in this Subclass
CLUSTER: EH.1.138
CLUSTER: EH.2.142