Logo
Information on SUBCLASS 1.1.39
Subclass Accession number: 2668
Subclass: 1.1.39 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 27.2 +/- 21.7
Average RMSD (Å) : 0.360 +/- 0.134

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hXXGh
(φψ)-conformation: bbpea
Pattern: [ITV][ILV][FLV][CGST]x[G][AGV][DKST][EHQ][AGL][IL][efl]x[AL][FIV]x[AS][FIL]
Conservation:0.3640.733-0.065-0.659-1.2322.919-0.386-0.4210.583-0.6770.907-0.995-1.096-0.1100.209-1.0410.7170.250
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b5p_A_941b5p   A94111TIVTVGGSQALFNLFQAIEEEESHHHHHHHHHHHHHbbbbxeaaaaaaaaaaaa
1bw0_A_1071bw0   A107124VVLCSGGSHGILMAITAIEEEESHHHHHHHHHHHHHbbxbxeaaaaaaaaaaaa
1fg7_A_781fg7   A7895VLVSRGADEGIELLIRAFEEEESHHHHHHHHHHHHHbbbbxeaaaaaaaaaaaa
1lk9_A_1251lk9   A126143IVFGVGVTQLIHGLVISLEEEESHHHHHHHHHHHHHbbbbxeaaaaaaaaaaaa
1o4s_A_921o4s   A92109VVVTNGAKQALFNAFMALEEEESHHHHHHHHHHHHHbbxbxeaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5p_A_941b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 98
1b5p_A_941b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 99
1b5p_A_941b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 100
1b5p_A_941b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 101
1b5p_A_941b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE Q - 102
1b5p_A_941b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 104
1bw0_A_1071bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 111
1bw0_A_1071bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 112
1bw0_A_1071bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) G - 113
1bw0_A_1071bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) S - 114
1bw0_A_1071bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) H - 115
1bw0_A_1071bw0   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) I - 117
1fg7_A_781fg7   A     MSESELENOMETHIONINE L - 79
1fg7_A_781fg7   A     MSESELENOMETHIONINE V - 80
1fg7_A_781fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE R - 82
1fg7_A_781fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE G - 83
1fg7_A_781fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE A - 84
1fg7_A_781fg7   A     MSESELENOMETHIONINE D - 85
1fg7_A_781fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE D - 85
1fg7_A_781fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE E - 86
1fg7_A_781fg7   A     MSESELENOMETHIONINE I - 88
1fg7_A_781fg7   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE I - 88
1fg7_A_781fg7   A     MSESELENOMETHIONINE E - 89
1fg7_A_781fg7   A     MSESELENOMETHIONINE I - 92
1lk9_A_1251lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 130
1lk9_A_1251lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 131
1lk9_A_1251lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 132
1lk9_A_1251lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 133
1lk9_A_1251lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE Q - 134
1lk9_A_1251lk9   A     PLPPYRIDOXAL-5'-PHOSPHATE I - 136
1o4s_A_921o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 96
1o4s_A_921o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 97
1o4s_A_921o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 98
1o4s_A_921o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE K - 99
1o4s_A_921o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE Q - 100
1o4s_A_921o4s   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 102

Clusters included in this Subclass
CLUSTER: EH.0.39