Logo
Information on SUBCLASS 1.1.64
Subclass Accession number: 2693
Subclass: 1.1.64 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.14 (>75 %)  1.14.13 (>75 %)  1.14.13.39
GO : GO:0004497 (>75 %)  GO:0004517 (>75 %)  GO:0005489 (>75 %)  GO:0005515 (>75 %)  GO:0005516 (>75 %)  GO:0010181 (>75 %)  GO:0016705 (>75 %)  GO:0016709 (>75 %)  GO:0048037 (>75 %)  GO:0050662 (>75 %)  
SCOP : 56511 (>75 %)  56512 (>75 %)  56513 (>75 %)  
Number of loops: 2

Average sequence ID (%) : 56.2 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: RGDhA
(φψ)-conformation: bepaa
Pattern: [IV][R][G][D][AP][A][NT][LV][E][FI][T][EQ][L][C][I][DQ]
Conservation:-0.4180.4361.0051.005-1.129-0.133-0.845-0.9870.436-0.9870.436-0.418-0.1332.712-0.133-0.845
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1nos_*_2711nos   -271286IRGDAATLEFTQLCIDEEE-GGGHHHHHHHHHbbebaaaaaaaaaaaa
1q2o_A_2631q2o   A263278VRGDPANVEITELCIQEEE-GGGHHHHHHHHHbbexaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1q2o_A_2631q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE N - 269

Clusters included in this Subclass
CLUSTER: EH.3.296