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Information on SUBCLASS 1.4.1
Subclass Accession number: 2736
Subclass: 1.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 19

Average sequence ID (%) : 12.7 +/- 18.3
Average RMSD (Å) : 0.537 +/- 0.138

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXphX
(φψ)-conformation: bblaa
Pattern: xx[EGKNQR][afilpw][derstw][aekl]x
Conservation:-0.621-0.8601.961-0.8790.4910.033-0.124
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_2481aa6   -249255TEGFEEYEE-HHHHbbgaaaa
1ay7_B_491ay7   B5359WRQFEQSEETHHHHbxlaaaa
1dms_*_2681dms   -269275TSGFDKFEE-HHHHbbvaaaa
1ekf_A_881ekf   A9096LFRPWLNEESHHHHxxlaaaa
1eu1_A_2681eu1   A269275TTGFDLFEE-HHHHbbvaaaa
1fdq_A_61fdq   A1319SQNFDEYEESHHHHbbvaaaa
1ftp_A_81ftp   A1420QTNFEEYEESHHHHbbvaaaa
1g5t_A_1231g5t   A126132LDELTYMEETHHHHbxvaaaa
1gw0_A_5141gw0   A518524LERPADLEESHHHHxxlaaaa
1h16_A_5191h16   A526532IAGLSVAEE-HHHHbbvaaaa
1iuq_A_1131iuq   A114120VGNLSLFEE-HHHHbxlaaaa
1ixz_A_2501ixz   A254260IDEIDAVEETHHHHxxlaaaa
1iye_A_491iye   A5056VFRHREHEETHHHHxxlaaaa
1jgt_A_4211jgt   A421427RDKWVLREETHHHHbxlaaaa
1n3l_A_201n3l   A2127VLGEEKLEE-HHHHbbvaaaa
1q15_A_4191q15   A419425EVKNILREESHHHHbbvaaaa
1qde_A_1651qde   A168174LDEADEMEETHHHHbxlaaaa
1ryh_A_1291ryh   A133139GTKLDLREE-HHHHxxvaaaa
1tmo_*_2741tmo   -275281SLGFEEFEE-HHHHbbvaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ekf_A_881ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 96
1ekf_A_881ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 99
1fdq_A_61fdq   A     HXADOCOSA-4,7,10,13,16,19-HEXAENOIC ACID L - 10
1fdq_A_61fdq   A     HXADOCOSA-4,7,10,13,16,19-HEXAENOIC ACID F - 16
1fdq_A_61fdq   A     HXADOCOSA-4,7,10,13,16,19-HEXAENOIC ACID Y - 19
1fdq_A_61fdq   A     HXADOCOSA-4,7,10,13,16,19-HEXAENOIC ACID M - 20
1g5t_A_1231g5t   A     MGMAGNESIUM ION D - 127
1g5t_A_1231g5t   A     ATPADENOSINE-5'-TRIPHOSPHATE D - 127
1g5t_A_1231g5t   A     MGMAGNESIUM ION E - 128
1g5t_A_1231g5t   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 128
1g5t_A_1231g5t   A     MGMAGNESIUM ION Y - 131
1g5t_A_1231g5t   A     ATPADENOSINE-5'-TRIPHOSPHATE Y - 131
1ixz_A_2501ixz   A     HGMERCURY (II) ION C - 250
1ixz_A_2501ixz   A     HGMERCURY (II) ION I - 251
1ixz_A_2501ixz   A     HGMERCURY (II) ION V - 252
1iye_A_491iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID H - 56
1iye_A_491iye   A     PGU4-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-BUTYRIC ACID R - 59
1jgt_A_4211jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER D - 422
1jgt_A_4211jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER K - 423
1jgt_A_4211jgt   A     MGMAGNESIUM ION K - 423
1jgt_A_4211jgt   A     APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER R - 427
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_5141gw0   A DC2SO4 BINDING SITE FOR CHAIN AR - 520

Clusters included in this Subclass
CLUSTER: EH.0.15
CLUSTER: EH.1.36