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Information on SUBCLASS 10.8.1
Subclass Accession number: 3557
Subclass: 10.8.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>50 %)  1.3.99 (>50 %)  1.3.99.1
GO : GO:0000104 (>50 %)  GO:0005386 (>50 %)  GO:0005489 (>50 %)  GO:0009055 (>50 %)  GO:0016627 (>50 %)  
SCOP : 51904 (>75 %)  51905 (>75 %)  51934 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 47.9 +/- 13.7
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXGhHGANRhhXNX
(φψ)-conformation: bbgaaeabppplaa
Pattern: x[TY][GT][G][LV][H][G][A][N][R][LM][AG][GS][N][AS][IL]x[DE][CI][ILV][TV][FY][G][RW]x[A][AG][AE][DES][AI][AT][KR]
Conservation:-1.000-0.831-0.9081.468-0.5122.6021.4680.3341.4680.901-0.109-0.465-0.4651.468-0.512-0.230-1.3570.219-0.471-0.422-0.6290.9011.468-0.629-1.4300.334-0.465-0.761-0.737-1.076-0.6730.055
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1chu_A_3771chu   A377408SYTGLHGANRMASNSLLECLVYGWSAAEDITREE-SSSTTS--TTHHHHHHHHHHHHHHHHHHHbbavaaeabbxpvaaaaaaaaaaaaaaaaaaa
1d4d_A_5361d4d   A536566.TGGVHGANRLGGNAISDIVTYGRIAGASAAK.EESTTTTS--TTHHHHHHHHHHHHHHHHHHH.xbgaaeabxxpvaaaaaaaaaaaaaaaaaaa
1q9i_A_5361q9i   A536566.TGGVHGANRLGGNAISDIITFGRLAGEEAAK.EESSSTTS--TTHHHHHHHHHHHHHHHHHHH.xbgaaeabxxpvaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 544
1d4d_A_5361d4d   A     SINSUCCINIC ACID R - 544
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 545
1d4d_A_5361d4d   A     SINSUCCINIC ACID L - 545
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 546
1d4d_A_5361d4d   A     SINSUCCINIC ACID G - 546
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 547
1d4d_A_5361d4d   A     SINSUCCINIC ACID G - 547
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 548
1d4d_A_5361d4d   A     SINSUCCINIC ACID N - 548
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 549
1d4d_A_5361d4d   A     SINSUCCINIC ACID A - 549
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 550
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 551
1d4d_A_5361d4d   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 553
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE R - 544
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE L - 545
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE G - 546
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE G - 547
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE N - 548
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE A - 549
1q9i_A_5361q9i   A     TEOMALATE LIKE INTERMEDIATE I - 550

Clusters included in this Subclass
CLUSTER: EH.11.48