ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 16.2.1

Subclass Accession number: 3613
Subclass: 16.2.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.7 5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.1
GO : GO:0004091 (>75 %)  GO:0004104 (>75 %)  GO:0004807 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)
SCOP : 51351 (>75 %)  51352 (>75 %)  53473 (>75 %)  53474 (>75 %)  53475 (>75 %)

Number of loops: 5

Average sequence ID (%) : 49.6 +/- 23.8
Average RMSD (Å) : 0.440 +/- 0.207

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	hAQNhpXhXpGAhTGEhShX
(φψ)-conformation:	bbabbpababepbplpbbaa

Pattern:	[aklt]	[ITV]	[AG]	[AI]	[Q]	[NT]	[ACMV]	[HSY]	[FKL]	[AFKV]	[ADGPT]	[KNQS]	[G]	[AS]	[FY]	[T]	[G]	[E]	x	[S]	[APV]	[adgv]	[mq]	[AIL]	[K]	[D]
Conservation:	-1.164	-0.336	0.143	-0.456	1.114	0.279	-0.776	-0.295	-1.085	-1.321	-1.243	-0.553	1.609	-0.026	0.990	1.114	1.609	1.114	-0.794	0.619	-0.703	-1.342	-0.601	-0.619	1.114	1.609

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1mo0_A_58	1mo0	A	59	84	LVAAQNCYKVPKGAFTGEISPAMIKD	EEEES---SSSSSS-TT---HHHHHH	xbbxabbbabwbexbpvbbbaaaaaa
1ney_A_59	1ney	A	60	85	TVGAQNAYLKASGAFTGENSVDQIKD	EEEES---SSSSSS-TT---HHHHHH	bbbxabbxababexbpvxbbaaaaaa
1o5x_A_60	1o5x	A	60	85	STGIQNVSKFGNGSYTGEVSAEIAKD	EEEES---SS-SSS-TT---HHHHHH	xbbbabbxabxxexbpvxbxaaaaaa
1r2r_A_60	1r2r	A	60	85	AVAAQNCYKVTNGAFTGEISPGMIKD	EEEES---SSSS-S-TT---HHHHHH	xbbxabbbababexbpvbbbaaaaaa
2btm_A_58	2btm	A	59	84	KIGAQTMHFADQGAYTGEVSPVMLKD	EEEES---SSSSSS-TT---HHHHHH	xbbbaebxaxabexbpvxbxaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1mo0_A_58	1mo0	A	ACTACETATE ION	T - 74
1ney_A_59	1ney	A	13P1,3-DIHYDROXYACETONEPHOSPHATE	T - 75
1o5x_A_60	1o5x	A	2PG2-PHOSPHOGLYCERIC ACID	S - 73
1o5x_A_60	1o5x	A	2PG2-PHOSPHOGLYCERIC ACID	T - 75
1r2r_A_60	1r2r	A	DMSDIMETHYL SULFOXIDE	Y - 67
1r2r_A_60	1r2r	A	DMSDIMETHYL SULFOXIDE	K - 68
2btm_A_58	2btm	A	PGA2-PHOSPHOGLYCOLIC ACID	T - 74

Clusters included in this Subclass