Logo
Information on SUBCLASS 2.1.11
Subclass Accession number: 1051
Subclass: 2.1.11 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 18

Average sequence ID (%) : 8.8 +/- 12.4
Average RMSD (Å) : 0.689 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: [afilmvy]x[cfiltvy][dehnpqt][ADENRST]xxx[afilpvw]
Conservation:0.422-1.016-0.0461.0651.974-0.674-0.922-0.148-0.655
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg6_*_1831bg6   -184192VAVENVLHTEE-S-HHHHbxbabaaaa
1ci9_A_3291ci9   A329337AVLDDPAAAEEES-HHHHxbxabaaaa
1dbw_A_291dbw   A3139KMHQSAEAFEEES-HHHHbxbabaaaa
1e2h_A_3491e2h   A350358THVTTPGSIEEESSTTHHbxxabaaaa
1f1u_A_2111f1u   A217225FATHEKHNIEE-SSHHHHbxbabaaaa
1hbn_B_2911hbn   B294302YGTDDLAMWEE-S-HHHHxbbabaaaa
1hwl_A_5931hwl   A594602VRLPRACDSEE-SSHHHHbbbabaaaa
1i7q_A_2671i7q   A272280LPCPAPLGPEE-S-SHHHbwbabaaaa
1jc4_A_121jc4   A1523YACPDADEAEE-S-HHHHbxbabaaaa
1ks9_A_1631ks9   A164172AWHNNIRAEEE-TTHHHHbxbabaaaa
1o5z_A_3871o5z   A387395EVIEDPLEAEE-SSHHHHbbbaxaaaa
1omw_A_6291omw   A632640LQCDSDPELEE-SSHHHHbbbabaaaa
1pxw_A_821pxw   A8391IYVPSKKELEEES-HHHHbbbabaaaa
1pzx_A_1571pzx   A161169FTVDNLDYLEE-S-HHHHbbbabaaaa
1r8h_A_3291r8h   A333341VTYHSEEQREE-SSHHHHbbbabaaaa
1ro2_A_1071ro2   A110118MDFESKEKLEEES-HHHHxbxabaaaa
1uir_A_1031uir   A106114MVDIDGELVEEES-HHHHbbbabaaaa
2dap_*_2582dap   -265273LKLDRNPDFEEESBHHHHbbbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dbw_A_291dbw   A     15PPOLYETHYLENE GLYCOL (N=34) A - 29
1f1u_A_2111f1u   A     MW2MANGANESE DIHYDRATE ION H - 214
1f1u_A_2111f1u   A     MW2MANGANESE DIHYDRATE ION A - 216
1i7q_A_2671i7q   A     PYRPYRUVIC ACID S - 267
1jc4_A_121jc4   A     MSESELENOMETHIONINE H - 12
1jc4_A_121jc4   A     MSESELENOMETHIONINE V - 13
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 14
1jc4_A_121jc4   A     MSESELENOMETHIONINE Y - 15
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 16
1jc4_A_121jc4   A     MSESELENOMETHIONINE C - 17
1jc4_A_121jc4   A     MSESELENOMETHIONINE P - 18
1jc4_A_121jc4   A     MSESELENOMETHIONINE D - 19
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 20
1jc4_A_121jc4   A     MSESELENOMETHIONINE A - 23
1jc4_A_121jc4   A     MSESELENOMETHIONINE S - 24
1jc4_A_121jc4   A     MSESELENOMETHIONINE K - 25
1jc4_A_121jc4   A     MSESELENOMETHIONINE Y - 27
1jc4_A_121jc4   A     MSESELENOMETHIONINE Q - 28
1jc4_A_121jc4   A     MSESELENOMETHIONINE F - 31
1pzx_A_1571pzx   A     PLMPALMITIC ACID H - 159
1pzx_A_1571pzx   A     PLMPALMITIC ACID F - 161
1pzx_A_1571pzx   A     PLMPALMITIC ACID L - 169
1r8h_A_3291r8h   A     PO4PHOSPHATE ION V - 347
1ro2_A_1071ro2   A     MNMANGANESE (II) ION D - 111
2dap_*_2582dap   *     API2,6-DIAMINOPIMELIC ACID N - 270
2dap_*_2582dap   *     API2,6-DIAMINOPIMELIC ACID T - 274

Clusters included in this Subclass
CLUSTER: EH.3.24