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Information on SUBCLASS 2.1.5
Subclass Accession number: 1045
Subclass: 2.1.5 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 31

Average sequence ID (%) : 10.8 +/- 13.8
Average RMSD (Å) : 0.684 +/- 0.205

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: x[agilptv]xxx[adenqrst]x[adekqrst]x[acfgilmvy]
Conservation:0.0260.534-1.210-0.122-0.4591.698-1.0191.040-1.2200.732
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_A_6921a9x   A692701NATVTAIEMAEEE--SHHHHbbxbaxaaaa
1ad1_A_801ad1   A8291SVDTFRSEVAEEE-S-HHHHbbxbabaaaa
1b5t_A_1791b5t   A182191TQFFFDVESYEEE-S-HHHHxxxbabaaaa
1bht_A_601bht   A6170TKKVNTADQCEEE-SSHHHHbbxbabaaaa
1c1d_A_371c1d   A4352AAQYSNLADAEE--SSHHHHbbxbabaaaa
1dxe_A_2131dxe   A214223GILAPVEADAEEE--SHHHHbbbbaxaaaa
1dz3_A_31dz3   A615CIADDNRELVEEE-S-HHHHbbbbaxaaaa
1euh_A_4061euh   A408417SIFTNDFPRAEEE-S-HHHHbbbbabaaaa
1eye_A_831eye   A8493SIDTMRADVAEEE-S-HHHHbbxbabaaaa
1ezv_B_2831ezv   B288297FVRDQDSAVVEEEESSHHHHbbbbaxaaaa
1g3q_A_1361g3q   A139148LVTNPEISCLEEE-S-HHHHxbbbabaaaa
1gqi_A_1111gqi   A115124IVAANSDVGVEEEESSHHHHbbbbabaaaa
1h6d_A_1091h6d   A113122ALVSGNAEKAEEE-S-HHHHbbbbabaaaa
1hdc_A_321hdc   A3443VLADVLDEEGEEEES-HHHHbxxbaxaaaa
1hnj_A_2401hnj   A242251VPHQANLRIIEE--S-HHHHbwxbabaaaa
1i7q_A_1901i7q   A196205SVFSEQASEAEE----HHHHbbaxaxaaaa
1iat_A_2411iat   A243252VALSTNTTKVEEEES-HHHHbbbbabaaaa
1jif_A_461jif   A5059ISRTEHQIVAEEE-S-HHHHbbxbabaaaa
1jqb_A_11941jqb   A11951204IGVGSRPICVEEE---HHHHxxbbapaaaa
1k0r_A_2541k0r   A258267IDYDDDPARFEE--SSHHHHbxxbaxaaaa
1kbl_A_5351kbl   A537546RTNADTPEDTEEE--SHHHHbbxbabaaaa
1l6w_A_21l6w   A413YLDTSDVVAVEEE---HHHHbbbbaxaaaa
1lss_A_941lss   A95104IARISEIEYKEEE-SSTTHHbbxbaxaaaa
1mwq_A_561mwq   A6271IAQFENLQAAEE--SSHHHHbbxbabaaaa
1npy_A_1461npy   A147156KIYARNVKTGEEE-S-HHHHbbbbaxaaaa
1nqu_A_1111nqu   A115124VITADTLEQAEEEESSHHHHxxbbabaaaa
1o04_A_4281o04   A430439AVFTKDLDKAEEE-S-HHHHbbbbaxaaaa
1o20_A_3391o20   A341350SILTENYSNAEEE-S-HHHHbbbbabaaaa
1onr_A_131onr   A1524VADTGDIAAMEEESS-HHHHbxbbaxaaaa
1set_A_2741set   A282291VLTEASLEASEEE-S-HHHHbbbxabaaaa
1v93_A_1761v93   A179188TQLFFNNAHYEEE-SSHHHHxxxbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ad1_A_801ad1   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL K - 96
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 181
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 182
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 183
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 184
1c1d_A_371c1d   A     PHEPHENYLALANINE A - 38
1c1d_A_371c1d   A     PHEPHENYLALANINE G - 39
1c1d_A_371c1d   A     PHEPHENYLALANINE G - 40
1c1d_A_371c1d   A     PHEPHENYLALANINE T - 41
1c1d_A_371c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 42
1c1d_A_371c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 59
1c1d_A_371c1d   A     PHEPHENYLALANINE M - 63
1c1d_A_371c1d   A     PHEPHENYLALANINE K - 66
1c1d_A_371c1d   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE K - 66
1c1d_A_371c1d   A     PHEPHENYLALANINE M - 67
1dxe_A_2131dxe   A     PO4PHOSPHATE ION L - 216
1eye_A_831eye   A     PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE D - 86
1g3q_A_1361g3q   A     ADPADENOSINE-5'-DIPHOSPHATE V - 140
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL Y - 126
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL G - 127
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL F - 129
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL H - 130
1gqi_A_1111gqi   A     EDO1,2-ETHANEDIOL R - 133
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 115
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 116
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 117
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 118
1h6d_A_1091h6d   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 121
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A H - 244
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A A - 246
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A N - 247
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A R - 249
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A I - 250
1jif_A_461jif   A     BLMBLEOMYCIN A2 R - 47
1jif_A_461jif   A     BLMBLEOMYCIN A2 H - 49
1jif_A_461jif   A     BLMBLEOMYCIN A2 S - 51
1jif_A_461jif   A     BLMBLEOMYCIN A2 R - 52
1jif_A_461jif   A     BLMBLEOMYCIN A2 T - 53
1jif_A_461jif   A     BLMBLEOMYCIN A2 A - 59
1l6w_A_21l6w   A     GOLGLYCEROL D - 6
1lss_A_941lss   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 97
1lss_A_941lss   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 99
1lss_A_941lss   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE E - 100
1mwq_A_561mwq   A     ZNZINC ION S - 59
1mwq_A_561mwq   A     ZNZINC ION T - 60
1mwq_A_561mwq   A     ZNZINC ION V - 61
1mwq_A_561mwq   A     MSESELENOMETHIONINE A - 63
1mwq_A_561mwq   A     CACCACODYLATE ION A - 63
1mwq_A_561mwq   A     MSESELENOMETHIONINE Q - 64
1mwq_A_561mwq   A     CACCACODYLATE ION Q - 64
1mwq_A_561mwq   A     MSESELENOMETHIONINE F - 65
1mwq_A_561mwq   A     MSESELENOMETHIONINE E - 66
1mwq_A_561mwq   A     ZNZINC ION E - 66
1mwq_A_561mwq   A     MSESELENOMETHIONINE N - 67
1mwq_A_561mwq   A     MSESELENOMETHIONINE L - 68
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE I - 111
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE T - 112
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE F - 113
1nqu_A_1111nqu   A     RDL6,7-DIOXO-5H-8-RIBITYLAMINOLUMAZINE G - 114
1nqu_A_1111nqu   A     PO4PHOSPHATE ION T - 117
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL A - 439
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL N - 440
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL Y - 441
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL L - 442
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL S - 443
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL Q - 444
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL A - 445
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE Q - 274
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE F - 275
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE K - 277
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE V - 278
1set_A_2741set   A     SSA5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE E - 279
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 178
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 179
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 180
1v93_A_1761v93   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 181
1v93_A_1761v93   A     DOXDIOXANE R - 194
1v93_A_1761v93   A     DOXDIOXANE R - 197
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gqi_A_1111gqi   A AC4EDO BINDING SITE FOR CHAIN AH - 130
1gqi_A_1111gqi   A AC2EDO BINDING SITE FOR CHAIN AR - 133
1h6d_A_1091h6d   A AC1NDP BINDING SITE FOR CHAIN AS - 116

Clusters included in this Subclass
CLUSTER: EH.2.30
CLUSTER: EH.3.17
CLUSTER: EH.4.11