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Information on SUBCLASS 2.1.8
Subclass Accession number: 7130
Subclass: 2.1.8 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 33

Average sequence ID (%) : 12.8 +/- 15.5
Average RMSD (Å) : 0.733 +/- 0.203

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXXpXX
(φψ)-conformation: bbabaa
Pattern: [acfgiklv]x[afgilptv]x[adegqrst]x[dknrst]x[adeknrst]x[afilmvy]
Conservation:-0.544-0.564-0.087-1.1340.403-0.5741.837-0.9630.573-0.5721.625
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_4291a4s   A430440SGVFTRDISRAEEEE-S-HHHHbbbbbaxaaaa
1ad1_A_801ad1   A8191ISVDTFRSEVAEEEE-S-HHHHbbbxbabaaaa
1ad3_A_3621ad3   A363373LYVFSNNEKVIEEEE-S-HHHHbbbbbaxaaaa
1aj0_*_921aj0   -93103ISVDTSKPEVIEEEE---HHHHbbbxbaxaaaa
1b5t_A_1791b5t   A181191ITQFFFDVESYEEEE-S-HHHHbxxxbabaaaa
1b78_A_111b78   A1121IYFATGNPNKIEEEE-S-HHHHbxbxbabaaaa
1bud_A_1231bud   A126136IQDHSSVNRLVEE---SSHHHHbxxabaxaaaa
1bxs_A_4281bxs   A429439AGIFTNDIDKAEEEE-S-HHHHbbbbbaxaaaa
1c4z_A_8231c4z   A825835LLPEYSSKEKLEEEE-S-HHHHxbpxpabaaaa
1dxe_A_2131dxe   A213223SGILAPVEADAEEEE--SHHHHbbbbbaxaaaa
1dxh_A_2111dxh   A211221KLTLTEDPKEAEEEEES-HHHHbbbbbaxaaaa
1euh_A_4061euh   A407417ASIFTNDFPRAEEEE-S-HHHHbbbbbabaaaa
1eye_A_831eye   A8393VSIDTMRADVAEEEE-S-HHHHbbbxbabaaaa
1ezv_B_2831ezv   B287297LFVRDQDSAVVEEEEESSHHHHbbbbbaxaaaa
1f07_A_1671f07   A168178ALINASNPKDFEEE---SHHHHbxbxbabaaaa
1f07_A_2001f07   A206216CCSIDEDAAAAEEEE-SSHHHHxbbbbaxaaaa
1f8m_A_661f8m   A6777NALGALTGNMAEEEB--SHHHHbbbxbabaaaa
1hnj_A_2401hnj   A241251LVPHQANLRIIEEE--S-HHHHbbwxbabaaaa
1hqk_A_1111hqk   A114124GVITADTLEQAEEEEESSHHHHabxbbabaaaa
1iat_A_2411iat   A242252FVALSTNTTKVEEEEES-HHHHbbbbbabaaaa
1jqb_A_11941jqb   A11941204IIGVGSRPICVEEEE---HHHHbxxbbapaaaa
1kbl_A_5351kbl   A536546VRTNADTPEDTEEEE--SHHHHbbbxbabaaaa
1kz1_A_1171kz1   A120130GLLTVLNEEQAEEEEESSHHHHaxxbbabaaaa
1l6w_A_21l6w   A313LYLDTSDVVAVEEEE---HHHHbbbbbaxaaaa
1m6y_A_501m6y   A5161IIGIDVDSEVLEEEEES-HHHHbbbbbaxaagg
1nd1_A_1231nd1   A126136VRDHSKNNLWVEE---SSHHHHbxxabaxaaaa
1nqk_A_2231nqk   A229239HVIVRETNDEAEEEEESSHHHHxbbxbabaaaa
1o04_A_4281o04   A429439AAVFTKDLDKAEEEE-S-HHHHbbbbbaxaaaa
1ofg_A_571ofg   A6070EALVSGNAEKAEEEE-S-HHHHabbbbabaaaa
1onr_A_131onr   A1424VVADTGDIAAMEEEESS-HHHHxbxbbaxaaaa
1rvv_1_1111rvv   1114124GIVTTENIEQAEEEEESSHHHHaxxbbabaaaa
1ses_A_2741ses   A281291YVLTEASLEASEEEE-S-HHHHbbbbxabaaaa
7aat_A_2677aat   A270280FTVICRDAEEAEEEE-SSHHHHbbbxbabaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ad1_A_801ad1   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL K - 96
1aj0_*_921aj0   *     PH22-AMINO-6-HYDROXYMETHYL-7,8-DIHYDRO-3H-PTERIDIN-4-ONE D - 96
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 181
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 182
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 183
1b5t_A_1791b5t   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 184
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED H - 142
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED E - 143
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED H - 146
1dxe_A_2131dxe   A     PO4PHOSPHATE ION L - 216
1eye_A_831eye   A     PMMPTERIN-6-YL-METHYL-MONOPHOSPHATE D - 86
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL I - 170
1f07_A_1671f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID N - 171
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL N - 171
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL A - 172
1f07_A_1671f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID S - 173
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL D - 177
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL A - 180
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL A - 181
1f07_A_1671f07   A     MPD2-METHYL-2,4-PENTANEDIOL L - 184
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID Y - 204
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID T - 205
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID C - 206
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID C - 207
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID V - 223
1f07_A_2001f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID I - 227
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A H - 244
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A A - 246
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A N - 247
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A R - 249
1hnj_A_2401hnj   A     MLCMALONYL-COENZYME A I - 250
1l6w_A_21l6w   A     GOLGLYCEROL D - 6
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 54
1m6y_A_501m6y   A     MSESELENOMETHIONINE D - 55
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 55
1m6y_A_501m6y   A     MSESELENOMETHIONINE V - 56
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 56
1m6y_A_501m6y   A     MSESELENOMETHIONINE D - 57
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 57
1m6y_A_501m6y   A     MSESELENOMETHIONINE S - 58
1m6y_A_501m6y   A     SAHS-ADENOSYL-L-HOMOCYSTEINE V - 60
1nd1_A_1231nd1   A     ZNZINC ION H - 142
1nd1_A_1231nd1   A     ZNZINC ION E - 143
1nd1_A_1231nd1   A     ZNZINC ION H - 146
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL A - 439
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL N - 440
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL Y - 441
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL L - 442
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL S - 443
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL Q - 444
1o04_A_4281o04   A     EDO1,2-ETHANEDIOL A - 445
1ofg_A_571ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 63
1ofg_A_571ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 64
1ofg_A_571ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 65
1ofg_A_571ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 66
1ofg_A_571ofg   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 69
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE V - 111
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE I - 112
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE F - 113
1rvv_1_1111rvv   1     INI5-NITRO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE G - 114
1rvv_1_1111rvv   1     PO4PHOSPHATE ION T - 117
1rvv_1_1111rvv   1     PO4PHOSPHATE ION T - 118
1rvv_1_1111rvv   1     PO4PHOSPHATE ION Q - 123
1ses_A_2741ses   A     AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE Q - 274
1ses_A_2741ses   A     AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE F - 275
1ses_A_2741ses   A     AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE K - 277
1ses_A_2741ses   A     AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE V - 278
1ses_A_2741ses   A     AHXSERYL-HYDROXAMATE-ADENOSINE MONOPHOSPHATE E - 279
7aat_A_2677aat   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 267
7aat_A_2677aat   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 295

Clusters included in this Subclass
CLUSTER: EH.1.56
CLUSTER: EH.2.18
CLUSTER: EH.3.12
CLUSTER: EH.4.6