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Information on SUBCLASS 2.2.16
Subclass Accession number: 1089
Subclass: 2.2.16 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005524 (>50 %)  GO:0030554 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 6.1 +/- 8.3
Average RMSD (Å) : 0.867 +/- 0.153

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: hXhXXX
(φψ)-conformation: bbppaa
Pattern: x[AST][GIV][DKW][LPY]x[EGS][AT]xx[EGK]
Conservation:-0.9101.166-0.590-0.590-0.910-0.2710.2082.2550.504-0.9100.048
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1l1l_A_5451l1l   A545555TTVKPSGTVAKEEB---HHHHHbbbbwpaaaaa
1o9p_A_2561o9p   A258268QAIDLPEAVHEEE----HHHHHbxbxxwaaaaa
1q2o_A_3551q2o   A355365FSGWYMSTEIGEE---BHHHHHbbFbxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o9p_A_2561o9p   A     MLAMALONIC ACID H - 273
1o9p_A_2561o9p   A     MLAMALONIC ACID Q - 277
1q2o_A_3551q2o   A     CACCACODYLATE ION F - 355
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 355
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE F - 355
1q2o_A_3551q2o   A     CACCACODYLATE ION S - 356
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 356
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE S - 356
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 357
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE G - 357
1q2o_A_3551q2o   A     ACTACETATE ION W - 358
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 358
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE W - 358
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 359
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE Y - 359
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 360
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE M - 360
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 362
1q2o_A_3551q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 363
1q2o_A_3551q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE E - 363
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o9p_A_2561o9p   A AC1MLA BINDING SITE FOR CHAIN AQ - 277

Clusters included in this Subclass
CLUSTER: EH.4.158