Information on SUBCLASS 2.2.5 |
Subclass Accession number: 1078
Subclass: 2.2.5 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 12.5 +/- 16.3 Average RMSD (Å) : 0.638 +/- 0.226 Consensus geometry
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Consensus Sequence: | XphpXp |
(φψ)-conformation: | bbppaa |
Pattern: | [cilvy] | x | [AFIL] | [DNPST] | [dekpq] | [DEGRT] | [aegqr] | x |
Conservation: | -1.031 | -1.327 | 1.712 | 0.744 | -0.045 | 0.657 | -0.416 | -0.292 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1beb_A_147 | 1beb | A | 149 | 156 | LSFNPTQL | EE--HHHH | bbbxaaaa |
1iuh_A_2 | 1iuh | A | 7 | 14 | VFLPEEVR | EE--HHHH | bxbxaaaa |
1jhs_A_168 | 1jhs | A | 176 | 183 | VPLTKEEA | EE--HHHH | bxxxaaaa |
1n97_A_2 | 1n97 | A | 2 | 9 | KRLSLREA | EE--HHHH | xbxxaaaa |
1p9r_A_402 | 1p9r | A | 404 | 411 | YEADKEQR | EE--HHHH | bbpxaaaa |
1ual_A_83 | 1ual | A | 92 | 99 | RKLDQGGV | EE--HHHH | xxxbaaaa |
1vhy_A_17 | 1vhy | A | 18 | 25 | CYLSEDAA | EE--HHHH | bxxxaaaa |
1wdn_A_64 | 1wdn | A | 69 | 76 | ITITDERK | EE--HHHH | xpxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1n97_A_2 | 1n97 | A | EGLETHYLENE GLYCOL | L - 13 |
1n97_A_2 | 1n97 | A | EGLETHYLENE GLYCOL | Q - 17 |
1ual_A_83 | 1ual | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Y - 86 |
1ual_A_83 | 1ual | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | L - 87 |
1ual_A_83 | 1ual | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | S - 88 |
1ual_A_83 | 1ual | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | P - 89 |
1ual_A_83 | 1ual | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | Q - 90 |
1vhy_A_17 | 1vhy | A | MSESELENOMETHIONINE | H - 27 |
1vhy_A_17 | 1vhy | A | MSESELENOMETHIONINE | V - 28 |
1vhy_A_17 | 1vhy | A | MSESELENOMETHIONINE | A - 29 |
Clusters included in this Subclass |
CLUSTER: EH.2.66 |
CLUSTER: EH.3.80 |