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Information on SUBCLASS 2.2.5
Subclass Accession number: 1078
Subclass: 2.2.5 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 12.5 +/- 16.3
Average RMSD (Å) : 0.638 +/- 0.226

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XphpXp
(φψ)-conformation: bbppaa
Pattern: [cilvy]x[AFIL][DNPST][dekpq][DEGRT][aegqr]x
Conservation:-1.031-1.3271.7120.744-0.0450.657-0.416-0.292
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1beb_A_1471beb   A149156LSFNPTQLEE--HHHHbbbxaaaa
1iuh_A_21iuh   A714VFLPEEVREE--HHHHbxbxaaaa
1jhs_A_1681jhs   A176183VPLTKEEAEE--HHHHbxxxaaaa
1n97_A_21n97   A29KRLSLREAEE--HHHHxbxxaaaa
1p9r_A_4021p9r   A404411YEADKEQREE--HHHHbbpxaaaa
1ual_A_831ual   A9299RKLDQGGVEE--HHHHxxxbaaaa
1vhy_A_171vhy   A1825CYLSEDAAEE--HHHHbxxxaaaa
1wdn_A_641wdn   A6976ITITDERKEE--HHHHxpxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1n97_A_21n97   A     EGLETHYLENE GLYCOL L - 13
1n97_A_21n97   A     EGLETHYLENE GLYCOL Q - 17
1ual_A_831ual   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Y - 86
1ual_A_831ual   A     SAHS-ADENOSYL-L-HOMOCYSTEINE L - 87
1ual_A_831ual   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 88
1ual_A_831ual   A     SAHS-ADENOSYL-L-HOMOCYSTEINE P - 89
1ual_A_831ual   A     SAHS-ADENOSYL-L-HOMOCYSTEINE Q - 90
1vhy_A_171vhy   A     MSESELENOMETHIONINE H - 27
1vhy_A_171vhy   A     MSESELENOMETHIONINE V - 28
1vhy_A_171vhy   A     MSESELENOMETHIONINE A - 29

Clusters included in this Subclass
CLUSTER: EH.2.66
CLUSTER: EH.3.80