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Information on SUBCLASS 3.3.1
Subclass Accession number: 1146
Subclass: 3.3.1 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 25

Average sequence ID (%) : 8.4 +/- 11.6
Average RMSD (Å) : 0.780 +/- 0.250

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXXXXX
(φψ)-conformation: bbpppaa
Pattern: xxxxx[dhnpst]xxxxx
Conservation:-1.000-1.3390.2680.381-1.1112.2120.405-0.2750.207-0.7620.015
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azo_*_1421azo   -142152LLWSPNEEEDREEE---HHHHHbbbbxxaaaaa
1b63_A_2611b63   A261270.RMMRDRLINH.EE---HHHHH.xxbbbaaaaa
1bg2_*_81bg2   -1424RFRPLNESEVNEE----HHHHHbxbxxxaaaaa
1cp2_A_2041cp2   A206216HFVPRSPMVTKEEE---HHHHHbbxxxbaaaaa
1dtd_B_331dtd   B3545NPHPTAPWCREEE----HHHHHbpbpxxaaaaa
1ez0_A_191ez0   A2333AFPVHTEVEVNEEE---HHHHHxbxbxbaaaaa
1fmj_A_131fmj   A1322.FRELNPEEDK.EE---HHHHH.bbxxxaaaaa
1g55_A_3401g55   A340349.LRYFTPKEIA.EE---HHHHH.xbxxxaaaaa
1g5b_A_691g5b   A6979FRAVRGNHEQMEEE---HHHHHbbbbxbaaaaa
1gpe_A_1141gpe   A114124SWTRPDKVQIDEE----HHHHHxbbbwxaaaaa
1kbv_A_1841kbv   A184194GLQPFDMDKAVEEE-B-HHHHHexxxxbaaaaa
1lo7_A_1261lo7   A128138RAIEVPADYIEEEE---HHHHHbxbxppaaaaa
1m9f_C_101m9f   C1121VHQAISPRTLNEE----HHHHHbxbxxxaaaaa
1o5o_A_41o5o   A414LVVVDHPLIKHEEE---HHHHHxbxxbbaaaaa
1o9p_A_2561o9p   A258268QAIDLPEAVHEEE----HHHHHbxbxxwaaaaa
1p9r_A_4381p9r   A446456ELLLVDDALQEEEEE--HHHHHbxxbxbaaaaa
1pj5_A_3001pj5   A300309.RLDFTLEDFL.EE---HHHHH.bbpxbaaaaa
1qdm_A_71qdm   A1121KKRPIDRNSRVEE----HHHHHbbbxpbaaaaa
1rif_A_1101rif   A110120KRIEPHWYQKDEE----HHHHHxxbbxxaaaaa
1s5u_A_1201s5u   A120130KPRALPKSIVAEE----HHHHHbwbpppaaaaa
1ute_A_851ute   A8595WHVLAGNHDHLEEE---HHHHHbbbbxbaaaaa
1vj7_A_2371vj7   A239249YGRPKHIYSIYEE----HHHHHbxbxxxaaaaa
1vrt_A_2921vrt   A292301.VIPLTEEAEL.EE---HHHHH.bbxxxaaaaa
2eng_*_1812eng   -185195RQVQCPAELVAEEE---HHHHHbxbxxxaaaaa
6mht_A_2706mht   A270280KTRKLHPRECAEEE---HHHHHbbbxxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azo_*_1421azo   *     EDO1,2-ETHANEDIOL L - 142
1azo_*_1421azo   *     EDO1,2-ETHANEDIOL L - 143
1azo_*_1421azo   *     EDO1,2-ETHANEDIOL W - 144
1azo_*_1421azo   *     EDO1,2-ETHANEDIOL S - 145
1azo_*_1421azo   *     MSESELENOMETHIONINE D - 157
1azo_*_1421azo   *     MSESELENOMETHIONINE W - 158
1azo_*_1421azo   *     EDO1,2-ETHANEDIOL W - 158
1azo_*_1421azo   *     MSESELENOMETHIONINE E - 159
1azo_*_1421azo   *     MSESELENOMETHIONINE E - 160
1b63_A_2611b63   A     EDO1,2-ETHANEDIOL R - 261
1b63_A_2611b63   A     EDO1,2-ETHANEDIOL M - 262
1b63_A_2611b63   A     EDO1,2-ETHANEDIOL M - 263
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE R - 14
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE F - 15
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE R - 16
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE P - 17
1bg2_*_81bg2   *     ADPADENOSINE-5'-DIPHOSPHATE N - 19
1g5b_A_691g5b   A     MNMANGANESE (II) ION G - 74
1g5b_A_691g5b   A     MNMANGANESE (II) ION N - 75
1g5b_A_691g5b   A     MNMANGANESE (II) ION H - 76
1gpe_A_1141gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 114
1gpe_A_1141gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 115
1gpe_A_1141gpe   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 116
1lo7_A_1261lo7   A     4CO4-HYDROXYPHENACYL COENZYME A L - 127
1lo7_A_1261lo7   A     4CO4-HYDROXYPHENACYL COENZYME A R - 128
1lo7_A_1261lo7   A     4CO4-HYDROXYPHENACYL COENZYME A A - 129
1lo7_A_1261lo7   A     4CO4-HYDROXYPHENACYL COENZYME A I - 130
1o9p_A_2561o9p   A     MLAMALONIC ACID H - 273
1o9p_A_2561o9p   A     MLAMALONIC ACID Q - 277
1p9r_A_4381p9r   A     ZNZINC ION Y - 438
1p9r_A_4381p9r   A     MSESELENOMETHIONINE T - 442
1p9r_A_4381p9r   A     MSESELENOMETHIONINE G - 443
1p9r_A_4381p9r   A     MSESELENOMETHIONINE H - 445
1p9r_A_4381p9r   A     MSESELENOMETHIONINE L - 447
1p9r_A_4381p9r   A     MSESELENOMETHIONINE L - 448
1p9r_A_4381p9r   A     MSESELENOMETHIONINE L - 454
1p9r_A_4381p9r   A     MSESELENOMETHIONINE L - 457
1p9r_A_4381p9r   A     MSESELENOMETHIONINE I - 458
1s5u_A_1201s5u   A     EDO1,2-ETHANEDIOL P - 121
1s5u_A_1201s5u   A     EDO1,2-ETHANEDIOL R - 122
1s5u_A_1201s5u   A     EDO1,2-ETHANEDIOL A - 123
1ute_A_851ute   A     FEOMU-OXO-DIIRON G - 90
1ute_A_851ute   A     PO4PHOSPHATE ION N - 91
1ute_A_851ute   A     FEOMU-OXO-DIIRON N - 91
1ute_A_851ute   A     PO4PHOSPHATE ION H - 92
1ute_A_851ute   A     FEOMU-OXO-DIIRON H - 92
1vj7_A_2371vj7   A     GDPGUANOSINE-5'-DIPHOSPHATE R - 241
1vj7_A_2371vj7   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 243
1vj7_A_2371vj7   A     GDPGUANOSINE-5'-DIPHOSPHATE K - 251
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o9p_A_2561o9p   A AC1MLA BINDING SITE FOR CHAIN AQ - 277
1ute_A_851ute   A FEBRESIDUES THAT COORDINATE THE METAL IONS.N - 91

Clusters included in this Subclass
CLUSTER: EH.2.106
CLUSTER: EH.2.168
CLUSTER: EH.3.144
CLUSTER: EH.3.222
CLUSTER: EH.3.62
CLUSTER: EH.3.83
CLUSTER: EH.4.145
CLUSTER: EH.4.163
CLUSTER: EH.4.69
CLUSTER: EH.4.97