Information on SUBCLASS 3.6.5 |
Subclass Accession number: 2937
Subclass: 3.6.5 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 13.5 +/- 17.8 Average RMSD (Å) : 0.860 +/- 0.261 Consensus geometry
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Consensus Sequence: | hhXhXhp |
(φψ)-conformation: | bblppaa |
Pattern: | [IVY] | [FGIVW] | [AVY] | [efy] | [AGKQ] | [AIV] | x | [pv] | [ADET] | [DEH] | x | [ADPQ] | x | [AFILV] | [AKV] | [EKQ] | x |
Conservation: | 1.038 | -1.133 | 0.151 | -0.540 | -0.376 | 1.466 | -0.645 | -0.321 | -0.007 | 1.632 | -0.815 | -0.227 | -1.406 | -0.087 | -0.299 | 2.169 | -0.600 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dxy_*_2 | 1dxy | - | 3 | 19 | IIAYGARVDEIQYFKQW | EEE-S--TTTHHHHHHH | bbbbvpxaaaaaaaaaa |
1hw6_A_19 | 1hw6 | A | 19 | 35 | YGVFKVPPADTQRAVEE | EE--S--GGGHHHHHHH | xxpblbxaaaaaaaaaa |
1j4a_A_3 | 1j4a | A | 4 | 20 | IFAYAIREDEKPFLKEW | EEE-S--GGGHHHHHHH | bbbblxxaaaaaaaaaa |
1m2d_A_72 | 1m2d | A | 72 | 88 | VWYGQVKPEDVDEIVEK | EEE-S--GGGHHHHHHH | xbbblxbaaaaaaaaaa |
1pj5_A_354 | 1pj5 | A | 355 | 371 | YVAEAVWVTHSAGVAKA | EEEES--GGGHHHHHHH | bbbbvbxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dxy_*_2 | 1dxy | * | COI2-OXO-4-METHYLPENTANOIC ACID | R - 9 |
1j4a_A_3 | 1j4a | A | SULSULFATE ANION | K - 14 |
1j4a_A_3 | 1j4a | A | SULSULFATE ANION | P - 15 |
1j4a_A_3 | 1j4a | A | SULSULFATE ANION | L - 17 |
1j4a_A_3 | 1j4a | A | SULSULFATE ANION | K - 18 |
1j4a_A_3 | 1j4a | A | SULSULFATE ANION | E - 21 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 357 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 358 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 359 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 360 |
1pj5_A_354 | 1pj5 | A | ACTACETATE ION | W - 361 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | W - 361 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 362 |
1pj5_A_354 | 1pj5 | A | ACTACETATE ION | T - 363 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 363 |
1pj5_A_354 | 1pj5 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 364 |
Clusters included in this Subclass |
CLUSTER: EH.6.208 |
CLUSTER: EH.7.113 |