Information on SUBCLASS 3.8.3 |
Subclass Accession number: 2953
Subclass: 3.8.3 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 14.6 +/- 19.2 Average RMSD (Å) : 0.725 +/- 0.104 Consensus geometry
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Consensus Sequence: | XhXppXX |
(φψ)-conformation: | bbppbaa |
Pattern: | x | x | x | [AILV] | x | [DEHN] | [DNST] | [ekp] | x | [aegs] | x |
Conservation: | -0.223 | -0.962 | -0.666 | 1.205 | -0.519 | 1.852 | 1.177 | 0.403 | -1.040 | -0.461 | -0.767 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bxy_A_34 | 1bxy | A | 34 | 44 | ERVLEDTPAIR | EEEEE--HHHH | bbbbxxbaaaa |
1g8l_A_219 | 1g8l | A | 223 | 233 | LGIIRDDPHAL | EEEE-S-HHHH | aexxxxbaaaa |
1j5v_A_49 | 1j5v | A | 52 | 62 | VTKLPNNPLGD | EEEE-SSHHHH | bbbbxxbaaaa |
1o97_D_90 | 1o97 | D | 90 | 100 | VVLLPHSVDSL | EEEEE-SHHHH | bbbbxxbaaaa |
1qdq_A_147 | 1qdq | A | 150 | 160 | SYSVANNEKEI | EEEE-S-HHHH | bbbbpxbaaaa |
1the_A_147 | 1the | A | 150 | 160 | SYSVSDSEKEI | EEEE-S-HHHH | bbxbxxbaaaa |
1uz5_A_222 | 1uz5 | A | 226 | 236 | MGVARDDKESL | EEEE-SSHHHH | aebbxxbaaaa |
1v1a_A_50 | 1v1a | A | 53 | 63 | VGRVGEDELGA | EEEE-SSHHHH | bbbbpxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g8l_A_219 | 1g8l | A | GOLGLYCEROL | E - 219 |
1g8l_A_219 | 1g8l | A | GOLGLYCEROL | D - 228 |
1g8l_A_219 | 1g8l | A | GOLGLYCEROL | D - 229 |
1g8l_A_219 | 1g8l | A | GOLGLYCEROL | P - 230 |
1g8l_A_219 | 1g8l | A | GOLGLYCEROL | H - 231 |
1j5v_A_49 | 1j5v | A | MSESELENOMETHIONINE | A - 49 |
1j5v_A_49 | 1j5v | A | 2OFFERROUS ION, 2 WATERS COORDINATED | Y - 50 |
1j5v_A_49 | 1j5v | A | NINICKEL (II) ION | A - 63 |
1j5v_A_49 | 1j5v | A | NI3NICKEL (II) ION, 3 WATERS COORDINATED | A - 63 |
1j5v_A_49 | 1j5v | A | MSESELENOMETHIONINE | A - 64 |
1j5v_A_49 | 1j5v | A | NINICKEL (II) ION | G - 66 |
1j5v_A_49 | 1j5v | A | NI3NICKEL (II) ION, 3 WATERS COORDINATED | G - 66 |
1j5v_A_49 | 1j5v | A | NINICKEL (II) ION | H - 67 |
1j5v_A_49 | 1j5v | A | NI3NICKEL (II) ION, 3 WATERS COORDINATED | H - 67 |
1j5v_A_49 | 1j5v | A | NINICKEL (II) ION | L - 68 |
1j5v_A_49 | 1j5v | A | NI3NICKEL (II) ION, 3 WATERS COORDINATED | L - 68 |
1j5v_A_49 | 1j5v | A | NINICKEL (II) ION | K - 70 |
1j5v_A_49 | 1j5v | A | NI3NICKEL (II) ION, 3 WATERS COORDINATED | K - 70 |
1o97_D_90 | 1o97 | D | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 97 |
1o97_D_90 | 1o97 | D | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 100 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uz5_A_222 | 1uz5 | A | AC3SO4 BINDING SITE FOR CHAIN A | G - 223 |
1uz5_A_222 | 1uz5 | A | AC3SO4 BINDING SITE FOR CHAIN A | F - 225 |
1uz5_A_222 | 1uz5 | A | AC5SO4 BINDING SITE FOR CHAIN A | D - 231 |
Clusters included in this Subclass |
CLUSTER: EH.2.206 |
CLUSTER: EH.3.150 |
CLUSTER: EH.4.175 |